RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB6584", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Daviesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Daviesiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJEB6584 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33134281 33134281 PRJEB6584o_S_NODE_20975_length_199_cov_6.823171_g20867_i0 PRJEB6584 20975 199 6.823171 13.57811029 Candidatus Daviesbacteria bacterium GW2 2053542 Bacteria Bacteria 47 6.76e-4   NR KKS14343.1 1618429 g20867 i0 33.9 2.75879396984925 62 41 93.5 0 1 186 598 659 KKS14343.1 MAG: Tetratricopeptide repeat domain protein [Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5] diamond 549 47 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;