RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6584" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJEB6584 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33116808 33116808 PRJEB6584e_S_NODE_4079_length_155_cov_1.333333_g4064_i0 PRJEB6584 4079 155 1.333333 2.06666615 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 64.7 2.58e-12   NR XP_013761040.1 461836 g4064 i0 84.6 0.754838709677419 39 6 75.5 0 38 154 1 39 XP_013761040.1 uncharacterized protein AMSG_02007 [Thecamonas trahens ATCC 50062] diamond 117 64.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
33151403 33151403 PRJEB6584o_S_NODE_3416_length_406_cov_4.911051_g3308_i0 PRJEB6584 3416 406 4.911051 19.93886706 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 60.8 4.43e-8   NR XP_013759670.1 461836 g3308 i0 55.3 0.347290640394089 47 21 34.7 0 2 142 182 228 XP_013759670.1 countin-2 [Thecamonas trahens ATCC 50062] diamond 141 60.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;