RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB65329" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB65329 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11608595 11608595 PRJEB65329_S_NODE_17190_length_156_cov_3.629921_g17028_i0 PRJEB65329 17190 156 3.629921 5.66267676 Rotaria rotatoria 231624 Rotifera other_Eukaryota 191 2.61e-44   NTclustered gi|270267490|ref|NC_013568.1| 231624 g17028 i0 89.542 13.8333333333333 153 13 97 3 5 156 2423 2273 Rotaria rotatoria mitochondrion, complete genome blastn 2158 191 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
15432668 15432668 PRJEB65329_S_NODE_8473_length_244_cov_4.753488_g8311_i0 PRJEB65329 8473 244 4.753488 11.59851072 Philodina citrina 468664 Rotifera other_Eukaryota 220 5.699999999999998e-53   NTclustered gi|407227484|emb|FR856884.1| 468664 g8311 i0 84.322 39.9016393442623 236 26 95 10 13 244 1831 2059 Philodina citrina complete mitochondrial genome blastn 9736 220 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
30476432 30476432 PRJEB65329_S_NODE_8933_length_236_cov_2.212560_g8771_i0 PRJEB65329 8933 236 2.21256 5.2216416 Adineta ricciae 249248 Rotifera other_Eukaryota 51.2 3.41e-5   NR CAF0943995.1 249248 g8771 i0 67.6 0.470338983050847 37 12 47 0 146 36 12 48 CAF0943995.1 unnamed protein product [Adineta ricciae] diamond 111 51.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31361256 31361256 PRJEB65329_S_NODE_13056_length_184_cov_2.296774_g12894_i0 PRJEB65329 13056 184 2.296774 4.22606416 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 99.8 4.4899999999999997e-23   NR CAF5174633.1 392030 g12894 i0 83.1 8.625 59 10 96.2 0 181 5 69 127 CAF5174633.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 1587 99.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
32088634 32088634 PRJEB65329_S_NODE_10998_length_205_cov_3.312500_g10836_i0 PRJEB65329 10998 205 3.3125 6.790625 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 112 9.429999999999999e-30   NR CAF5155847.1 392030 g10836 i0 83.1 1.90243902439024 65 11 95.1 0 9 203 14 78 CAF5155847.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 390 112 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;