RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB65329" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB65329 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5232587 5232587 PRJEB65329_S_NODE_15245_length_167_cov_3.797101_g15083_i0 PRJEB65329 15245 167 3.797101 6.34115867 Lichtheimia ornata 688661 Fungi Fungi 52.8 0.014   NTclustered gi|2553564953|ref|XM_058483918.1| 688661 g15083 i0 100 0.167664670658683 28 0 17 0 1 28 990 1017 Lichtheimia ornata uncharacterized protein (O0I10_003852), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
5232603 5232603 PRJEB65329_S_NODE_16565_length_160_cov_1.755725_g16403_i0 PRJEB65329 16565 160 1.755725 2.80916 Radiomyces spectabilis 64574 Fungi Fungi 128 2.14e-25   NTclustered gi|2323742940|ref|XM_051563864.1| 64574 g16403 i0 82.979 9.15625 141 24 88 0 16 156 328 188 Radiomyces spectabilis 60S ribosomal protein L11 (BYT42DRAFT_48830), mRNA blastn 1465 128 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;