contig_metadata
58 rows where bioproject = "PRJEB65329" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129968 | 129968 | PRJEB65329_S_NODE_11061_length_204_cov_4.240000_g10899_i0 | PRJEB65329 | 11061 | 204 | 4.24 | 8.6496 | Sorex araneus | 42254 | Chordata | Chordata | 52.8 | 0.018 | NTclustered | gi|2487310310|ref|XM_055132156.1| | 42254 | g10899 | i0 | 100 | 0.137254901960784 | 28 | 0 | 14 | 0 | 83 | 110 | 4673 | 4700 | PREDICTED: Sorex araneus hornerin (LOC101550455), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Eulipotyphla | Soricidae | Sorex | Sorex araneus | |
| 130176 | 130176 | PRJEB65329_S_NODE_4221_length_425_cov_7.790404_g4059_i0 | PRJEB65329 | 4221 | 425 | 7.790404 | 33.109217 | Mus musculus | 10090 | Chordata | Chordata | 784 | 0 | NTclustered | gi|2548330513|gb|OQ915115.1| | 10090 | g4059 | i0 | 100 | 84.4752941176471 | 424 | 0 | 99 | 0 | 1 | 424 | 4658 | 5081 | Mus musculus clone BAC JH_40 45S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, 3' and 5' external transcribed spacers, complete sequence; and 18S ribosomal RNA gene, partial sequence | blastn | 35902 | 784 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 993949 | 993949 | PRJEB65329_S_NODE_1921_length_726_cov_8.789096_g1828_i0 | PRJEB65329 | 1921 | 726 | 8.789096 | 63.80883696 | Mus | 10088 | Chordata | Chordata | 1336 | 0 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g1828 | i0 | 99.862 | 100 | 726 | 1 | 100 | 0 | 1 | 726 | 560 | 1285 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 72600 | 1336 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 993950 | 993950 | PRJEB65329_S_NODE_2241_length_670_cov_4.535101_g2130_i0 | PRJEB65329 | 2241 | 670 | 4.535101 | 30.3851767 | Mus | 10088 | Chordata | Chordata | 1238 | 0 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g2130 | i0 | 100 | 100 | 670 | 0 | 100 | 0 | 1 | 670 | 10657 | 9988 | Mus musculus strain ME mitochondrion, complete genome | blastn | 67000 | 1238 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1404542 | 1404542 | PRJEB65329_S_NODE_12322_length_191_cov_2.382716_g12160_i0 | PRJEB65329 | 12322 | 191 | 2.382716 | 4.55098756 | Mus musculus | 10090 | Chordata | Chordata | 353 | 4.02e-93 | NTclustered | gi|74177417|dbj|AK158653.1| | 10090 | g12160 | i0 | 100 | 15.7277486910995 | 191 | 0 | 100 | 0 | 1 | 191 | 1814 | 1624 | Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230040E01 product:myelin and lymphocyte protein, T-cell differentiation protein, full insert sequence | blastn | 3004 | 353 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1404824 | 1404824 | PRJEB65329_S_NODE_9302_length_230_cov_2.000000_g9140_i0 | PRJEB65329 | 9302 | 230 | 2 | 4.6 | Mus musculus | 10090 | Chordata | Chordata | 425 | 1.05e-114 | NTclustered | gi|354781117|gb|JN945618.1| | 10090 | g9140 | i0 | 100 | 10.804347826087 | 230 | 0 | 100 | 0 | 1 | 230 | 24037 | 24266 | Mus musculus targeted non-conditional, lacZ-tagged mutant allele Sfrp5:tm1e(EUCOMM)Wtsi; transgenic | blastn | 2485 | 425 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2680203 | 2680203 | PRJEB65329_S_NODE_18223_length_152_cov_1.715447_g18061_i0 | PRJEB65329 | 18223 | 152 | 1.715447 | 2.60747944 | Mus musculus | 10090 | Chordata | Chordata | 281 | 1.46e-71 | NTclustered | gi|74225281|dbj|AK152892.1| | 10090 | g18061 | i0 | 100 | 84.2763157894737 | 152 | 0 | 100 | 0 | 1 | 152 | 1809 | 1658 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089I05 product:cathepsin D, full insert sequence | blastn | 12810 | 281 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2680297 | 2680297 | PRJEB65329_S_NODE_4803_length_381_cov_3.468750_g4641_i0 | PRJEB65329 | 4803 | 381 | 3.46875 | 13.2159375 | Mus musculus | 10090 | Chordata | Chordata | 704 | 0 | NTclustered | gi|74208799|dbj|AK132429.1| | 10090 | g4641 | i0 | 100 | 40.9422572178478 | 381 | 0 | 100 | 0 | 1 | 381 | 3823 | 3443 | Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632416A11 product:periaxin, full insert sequence | blastn | 15599 | 704 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3544432 | 3544432 | PRJEB65329_S_NODE_1543_length_819_cov_6.660759_g1464_i0 | PRJEB65329 | 1543 | 819 | 6.660759 | 54.55161621 | Mus | 10088 | Chordata | Chordata | 1513 | 0 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g1464 | i0 | 100 | 100 | 819 | 0 | 100 | 0 | 1 | 819 | 10635 | 11453 | Mus musculus strain ME mitochondrion, complete genome | blastn | 81900 | 1513 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3956164 | 3956164 | PRJEB65329_S_NODE_16624_length_159_cov_3.092308_g16462_i0 | PRJEB65329 | 16624 | 159 | 3.092308 | 4.91676972 | Mus musculus | 10090 | Chordata | Chordata | 294 | 1.98e-75 | NTclustered | gi|74218141|dbj|AK170809.1| | 10090 | g16462 | i0 | 100 | 16.377358490566 | 159 | 0 | 100 | 0 | 1 | 159 | 2181 | 2339 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201I06 product:N-myc downstream regulated 1, full insert sequence | blastn | 2604 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5232536 | 5232536 | PRJEB65329_S_NODE_12345_length_191_cov_1.753086_g12183_i0 | PRJEB65329 | 12345 | 191 | 1.753086 | 3.34839426 | Mus musculus | 10090 | Chordata | Chordata | 353 | 4.02e-93 | NTclustered | gi|919185050|ref|NM_009976.4| | 10090 | g12183 | i0 | 100 | 65.9685863874346 | 191 | 0 | 100 | 0 | 1 | 191 | 642 | 452 | Mus musculus cystatin C (Cst3), mRNA | blastn | 12600 | 353 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5232680 | 5232680 | PRJEB65329_S_NODE_3285_length_518_cov_13.764826_g3136_i0 | PRJEB65329 | 3285 | 518 | 13.764826 | 71.30179868 | Mus musculus | 10090 | Chordata | Chordata | 953 | 0 | NTclustered | gi|354781253|gb|JN945754.1| | 10090 | g3136 | i0 | 100 | 42.5096525096525 | 516 | 0 | 99 | 0 | 1 | 516 | 37663 | 37148 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Pcp4l1:tm1a(KOMP)Wtsi; transgenic | blastn | 22020 | 953 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6097060 | 6097060 | PRJEB65329_S_NODE_12405_length_190_cov_2.819876_g12243_i0 | PRJEB65329 | 12405 | 190 | 2.819876 | 5.3577644 | Chiroptera | 9397 | Chordata | Chordata | 56.5 | 0.001 | NTclustered | gi|2753726178|ref|XM_066269597.1| | 59482 | g12243 | i0 | 100 | 6.2421052631579 | 30 | 0 | 16 | 0 | 1 | 30 | 151 | 122 | PREDICTED: Saccopteryx bilineata POU class 3 homeobox 1 (POU3F1), mRNA | blastn | 1186 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Emballonuridae | Saccopteryx | Saccopteryx bilineata | |
| 6508223 | 6508223 | PRJEB65329_S_NODE_11486_length_199_cov_3.582353_g11324_i0 | PRJEB65329 | 11486 | 199 | 3.582353 | 7.12888247 | Mus musculus | 10090 | Chordata | Chordata | 368 | 1.51e-97 | NTclustered | gi|74208799|dbj|AK132429.1| | 10090 | g11324 | i0 | 100 | 23.9798994974874 | 199 | 0 | 100 | 0 | 1 | 199 | 3245 | 3047 | Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632416A11 product:periaxin, full insert sequence | blastn | 4772 | 368 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7782548 | 7782548 | PRJEB65329_S_NODE_4787_length_382_cov_3.484419_g4625_i0 | PRJEB65329 | 4787 | 382 | 3.484419 | 13.31048058 | Sitta europaea | 50251 | Chordata | Chordata | 52.8 | 0.036 | NTclustered | gi|2917575954|emb|OZ228623.1| | 50251 | g4625 | i0 | 96.875 | 0.167539267015707 | 32 | 0 | 8 | 1 | 127 | 158 | 70305060 | 70305030 | Sitta europaea genome assembly, chromosome: Z | blastn | 64 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Sittidae | Sitta | Sitta europaea | |
| 7782665 | 7782665 | PRJEB65329_S_NODE_9867_length_221_cov_2.020833_g9705_i0 | PRJEB65329 | 9867 | 221 | 2.020833 | 4.46604093 | Mus musculus | 10090 | Chordata | Chordata | 409 | 1.0100000000000001e-109 | NTclustered | gi|15215263|gb|BC012723.1| | 10090 | g9705 | i0 | 100 | 36.3348416289593 | 221 | 0 | 100 | 0 | 1 | 221 | 755 | 535 | Mus musculus insulin-like growth factor binding protein 6, mRNA (cDNA clone MGC:14073 IMAGE:4224052), complete cds | blastn | 8030 | 409 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8646976 | 8646976 | PRJEB65329_S_NODE_16627_length_159_cov_3.023077_g16465_i0 | PRJEB65329 | 16627 | 159 | 3.023077 | 4.80669243 | root | 1 | Root_unresolved | Root_unresolved | 56.5 | 0.001 | NTclustered | gi|1822412046|ref|XM_032969539.1| | 7757 | g16465 | i0 | 100 | 7.91194968553459 | 30 | 0 | 19 | 0 | 1 | 30 | 1409 | 1438 | PREDICTED: Petromyzon marinus MON1 homolog A, secretory trafficking associated (MON1A), transcript variant X1, mRNA | blastn | 1258 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Petromyzon | Petromyzon marinus | |
| 9057294 | 9057294 | PRJEB65329_S_NODE_14188_length_175_cov_2.260274_g14026_i0 | PRJEB65329 | 14188 | 175 | 2.260274 | 3.9554795 | Mus musculus | 10090 | Chordata | Chordata | 324 | 2.83e-84 | NTclustered | gi|74208799|dbj|AK132429.1| | 10090 | g14026 | i0 | 100 | 44.6914285714286 | 175 | 0 | 100 | 0 | 1 | 175 | 2501 | 2327 | Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632416A11 product:periaxin, full insert sequence | blastn | 7821 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9057363 | 9057363 | PRJEB65329_S_NODE_1908_length_730_cov_4.088445_g1816_i0 | PRJEB65329 | 1908 | 730 | 4.088445 | 29.8456485 | Mus musculus | 10090 | Chordata | Chordata | 1349 | 0 | NTclustered | gi|53668|emb|X53929.1| | 10090 | g1816 | i0 | 100 | 81.5383561643836 | 730 | 0 | 100 | 0 | 1 | 730 | 628 | 1357 | M.musculus mRNA for PGII (decorin) | blastn | 59523 | 1349 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9922033 | 9922033 | PRJEB65329_S_NODE_4548_length_399_cov_6.956757_g4386_i0 | PRJEB65329 | 4548 | 399 | 6.956757 | 27.75746043 | Mus | 10088 | Chordata | Chordata | 737 | 0 | NTclustered | gi|2746383733|gb|PP914355.1| | 10090 | g4386 | i0 | 100 | 100 | 399 | 0 | 100 | 0 | 1 | 399 | 5 | 403 | Mus musculus isolate SK2261 cytochrome b (CYTB) gene, partial cds; mitochondrial | blastn | 39900 | 737 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10333007 | 10333007 | PRJEB65329_S_NODE_11189_length_203_cov_2.810345_g11027_i0 | PRJEB65329 | 11189 | 203 | 2.810345 | 5.70500035 | Mus musculus | 10090 | Chordata | Chordata | 375 | 9.24e-100 | NTclustered | gi|74218141|dbj|AK170809.1| | 10090 | g11027 | i0 | 100 | 21.0591133004926 | 203 | 0 | 100 | 0 | 1 | 203 | 2373 | 2575 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201I06 product:N-myc downstream regulated 1, full insert sequence | blastn | 4275 | 375 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10333029 | 10333029 | PRJEB65329_S_NODE_12549_length_189_cov_1.606250_g12387_i0 | PRJEB65329 | 12549 | 189 | 1.60625 | 3.0358125 | Mus musculus | 10090 | Chordata | Chordata | 348 | 1.85e-91 | NTclustered | gi|1720409463|ref|XM_030253692.1| | 10090 | g12387 | i0 | 100 | 99.4285714285714 | 188 | 0 | 99 | 0 | 1 | 188 | 2617 | 2804 | PREDICTED: Mus musculus calsyntenin 1 (Clstn1), transcript variant X4, mRNA | blastn | 18792 | 348 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10333061 | 10333061 | PRJEB65329_S_NODE_14209_length_175_cov_1.931507_g14047_i0 | PRJEB65329 | 14209 | 175 | 1.931507 | 3.38013725 | Mus musculus | 10090 | Chordata | Chordata | 324 | 2.83e-84 | NTclustered | gi|12832103|dbj|AK002253.1| | 10090 | g14047 | i0 | 100 | 100 | 175 | 0 | 100 | 0 | 1 | 175 | 551 | 377 | Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610006K08 product:ferritin light chain 1, full insert sequence | blastn | 17500 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11197226 | 11197226 | PRJEB65329_S_NODE_11569_length_198_cov_5.686391_g11407_i0 | PRJEB65329 | 11569 | 198 | 5.686391 | 11.25905418 | Bovidae | 9895 | Chordata | Chordata | 135 | 1.6600000000000003e-27 | NTclustered | gi|2633806793|ref|XM_061399330.1| | 9906 | g11407 | i0 | 92.553 | 50.3131313131313 | 94 | 7 | 47 | 0 | 1 | 94 | 319 | 412 | PREDICTED: Bos javanicus histone H3.1 (LOC133236991), mRNA | blastn | 9962 | 135 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 11608571 | 11608571 | PRJEB65329_S_NODE_15690_length_165_cov_1.852941_g15528_i0 | PRJEB65329 | 15690 | 165 | 1.852941 | 3.05735265 | Mus musculus | 10090 | Chordata | Chordata | 305 | 9.59e-79 | NTclustered | gi|354781117|gb|JN945618.1| | 10090 | g15528 | i0 | 100 | 24.2727272727273 | 165 | 0 | 100 | 0 | 1 | 165 | 23858 | 23694 | Mus musculus targeted non-conditional, lacZ-tagged mutant allele Sfrp5:tm1e(EUCOMM)Wtsi; transgenic | blastn | 4005 | 305 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12883573 | 12883573 | PRJEB65329_S_NODE_10471_length_212_cov_2.912568_g10309_i0 | PRJEB65329 | 10471 | 212 | 2.912568 | 6.17464416 | Mus musculus | 10090 | Chordata | Chordata | 392 | 9.67e-105 | NTclustered | gi|354786848|gb|JN951349.1| | 10090 | g10309 | i0 | 100 | 26.5707547169811 | 212 | 0 | 100 | 0 | 1 | 212 | 31194 | 30983 | Mus musculus targeted non-conditional, lacZ-tagged mutant allele Scd2:tm1e(EUCOMM)Wtsi; transgenic | blastn | 5633 | 392 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12883639 | 12883639 | PRJEB65329_S_NODE_15051_length_169_cov_1.685714_g14889_i0 | PRJEB65329 | 15051 | 169 | 1.685714 | 2.84885666 | Mus musculus | 10090 | Chordata | Chordata | 313 | 5.859999999999999e-81 | NTclustered | gi|2274157089|ref|NM_001409563.1| | 10090 | g14889 | i0 | 100 | 31.9408284023669 | 169 | 0 | 100 | 0 | 1 | 169 | 802 | 970 | Mus musculus caveolin 1, caveolae protein (Cav1), transcript variant 8, mRNA | blastn | 5398 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12883828 | 12883828 | PRJEB65329_S_NODE_7591_length_264_cov_3.540426_g7429_i0 | PRJEB65329 | 7591 | 264 | 3.540426 | 9.34672464 | Elgaria multicarinata | 71008 | Chordata | Chordata | 52.8 | 0.024 | NTclustered | gi|2676912730|ref|XM_063141341.1| | 159646 | g7429 | i0 | 100 | 0.106060606060606 | 28 | 0 | 11 | 0 | 221 | 248 | 1645 | 1618 | PREDICTED: Elgaria multicarinata webbii URI1 prefoldin like chaperone (URI1), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Anguidae | Elgaria | Elgaria multicarinata | |
| 13747334 | 13747334 | PRJEB65329_S_NODE_18511_length_150_cov_2.809917_g18349_i0 | PRJEB65329 | 18511 | 150 | 2.809917 | 4.2148755 | root | 1 | Root_unresolved | Root_unresolved | 278 | 1.85e-70 | NTclustered | gi|74215112|dbj|AK170429.1| | 10090 | g18349 | i0 | 100 | 98.0733333333333 | 150 | 0 | 100 | 0 | 1 | 150 | 885 | 736 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630103E23 product:vimentin, full insert sequence | blastn | 14711 | 278 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 13747360 | 13747360 | PRJEB65329_S_NODE_5471_length_341_cov_2.326923_g5309_i0 | PRJEB65329 | 5471 | 341 | 2.326923 | 7.93480743 | Mus | 10088 | Chordata | Chordata | 625 | 1.5099999999999995e-174 | NTclustered | gi|74139211|dbj|AK165965.1| | 10090 | g5309 | i0 | 99.707 | 53.41642228739 | 341 | 1 | 100 | 0 | 1 | 341 | 552 | 892 | Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730024H15 product:secreted phosphoprotein 1, full insert sequence | blastn | 18215 | 625 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14158593 | 14158593 | PRJEB65329_S_NODE_4732_length_386_cov_4.540616_g4570_i0 | PRJEB65329 | 4732 | 386 | 4.540616 | 17.52677776 | Spinus spinus | 160760 | Chordata | Chordata | 54.7 | 0.01 | NTclustered | gi|2917669268|emb|OZ228762.1| | 160760 | g4570 | i0 | 100 | 0.150259067357513 | 29 | 0 | 8 | 0 | 238 | 266 | 15318883 | 15318855 | Spinus spinus genome assembly, chromosome: 13 | blastn | 58 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Spinus | Spinus spinus | |
| 15021780 | 15021780 | PRJEB65329_S_NODE_14212_length_175_cov_1.917808_g14050_i0 | PRJEB65329 | 14212 | 175 | 1.917808 | 3.356164 | Mus | 10088 | Chordata | Chordata | 324 | 2.83e-84 | NTclustered | gi|192002|gb|M12414.1|MUSAPOE | 10090 | g14050 | i0 | 100 | 100.005714285714 | 175 | 0 | 100 | 0 | 1 | 175 | 351 | 177 | Mouse apolipoprotein E mRNA, complete cds | blastn | 17501 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15432408 | 15432408 | PRJEB65329_S_NODE_13013_length_184_cov_2.954839_g12851_i0 | PRJEB65329 | 13013 | 184 | 2.954839 | 5.43690376 | Mus musculus | 10090 | Chordata | Chordata | 340 | 2.99e-89 | NTclustered | gi|354783296|gb|JN947797.1| | 10090 | g12851 | i0 | 100 | 82.1630434782609 | 184 | 0 | 100 | 0 | 1 | 184 | 12822 | 13005 | Mus musculus targeted non-conditional, lacZ-tagged mutant allele Zc3h10:tm1e(EUCOMM)Wtsi; transgenic | blastn | 15118 | 340 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15432446 | 15432446 | PRJEB65329_S_NODE_15793_length_164_cov_2.511111_g15631_i0 | PRJEB65329 | 15793 | 164 | 2.511111 | 4.11822204 | Mus musculus | 10090 | Chordata | Chordata | 302 | 1.23e-77 | NTclustered | gi|63146238|gb|BC095948.1| | 10090 | g15631 | i0 | 100 | 16.5182926829268 | 163 | 0 | 99 | 0 | 1 | 163 | 1924 | 2086 | Mus musculus RIKEN cDNA 2310043N10 gene, mRNA (cDNA clone IMAGE:4949800) | blastn | 2709 | 302 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15432670 | 15432670 | PRJEB65329_S_NODE_8513_length_244_cov_2.288372_g8351_i0 | PRJEB65329 | 8513 | 244 | 2.288372 | 5.58362768 | Mus musculus | 10090 | Chordata | Chordata | 52.8 | 0.022 | NTclustered | gi|29466509|emb|AL954850.12| | 10090 | g8351 | i0 | 94.286 | 0.14344262295082 | 35 | 0 | 14 | 2 | 3 | 35 | 84503 | 84537 | Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence | blastn | 35 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16296566 | 16296566 | PRJEB65329_S_NODE_1533_length_821_cov_10.099747_g1454_i0 | PRJEB65329 | 1533 | 821 | 10.099747 | 82.91892287 | Mus | 10088 | Chordata | Chordata | 1517 | 0 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g1454 | i0 | 100 | 100 | 821 | 0 | 100 | 0 | 1 | 821 | 2644 | 1824 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 82100 | 1517 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16706768 | 16706768 | PRJEB65329_S_NODE_17994_length_153_cov_1.741935_g17832_i0 | PRJEB65329 | 17994 | 153 | 1.741935 | 2.66516055 | Mus musculus | 10090 | Chordata | Chordata | 283 | 4.0799999999999995e-72 | NTclustered | gi|74177417|dbj|AK158653.1| | 10090 | g17832 | i0 | 100 | 11.0980392156863 | 153 | 0 | 100 | 0 | 1 | 153 | 1956 | 1804 | Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230040E01 product:myelin and lymphocyte protein, T-cell differentiation protein, full insert sequence | blastn | 1698 | 283 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16706909 | 16706909 | PRJEB65329_S_NODE_6094_length_311_cov_3.024823_g5932_i0 | PRJEB65329 | 6094 | 311 | 3.024823 | 9.40719953 | Mus musculus | 10090 | Chordata | Chordata | 575 | 1.3899999999999995e-159 | NTclustered | gi|595763502|ref|NM_001290817.1| | 10090 | g5932 | i0 | 100 | 100.440514469453 | 311 | 0 | 100 | 0 | 1 | 311 | 1058 | 1368 | Mus musculus secreted acidic cysteine rich glycoprotein (Sparc), transcript variant 2, mRNA | blastn | 31237 | 575 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16706986 | 16706986 | PRJEB65329_S_NODE_9534_length_226_cov_2.182741_g9372_i0 | PRJEB65329 | 9534 | 226 | 2.182741 | 4.93299466 | Mus musculus | 10090 | Chordata | Chordata | 418 | 1.7199999999999998e-112 | NTclustered | gi|63146238|gb|BC095948.1| | 10090 | g9372 | i0 | 100 | 18.9380530973451 | 226 | 0 | 100 | 0 | 1 | 226 | 844 | 1069 | Mus musculus RIKEN cDNA 2310043N10 gene, mRNA (cDNA clone IMAGE:4949800) | blastn | 4280 | 418 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17571801 | 17571801 | PRJEB65329_S_NODE_5354_length_346_cov_3.905363_g5192_i0 | PRJEB65329 | 5354 | 346 | 3.905363 | 13.51255598 | Lampetra | 13103 | Chordata | Chordata | 54.7 | 0.009 | NTclustered | gi|2814982574|emb|OZ078585.2| | 7748 | g5192 | i0 | 100 | 0.335260115606936 | 29 | 0 | 8 | 0 | 1 | 29 | 711014 | 711042 | Lampetra fluviatilis genome assembly, chromosome: 17 | blastn | 116 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra fluviatilis | |
| 17571802 | 17571802 | PRJEB65329_S_NODE_5574_length_335_cov_10.810458_g5412_i0 | PRJEB65329 | 5574 | 335 | 10.810458 | 36.2150343 | Mus | 10088 | Chordata | Chordata | 614 | 3.209999999999999e-171 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g5412 | i0 | 99.701 | 100 | 335 | 1 | 100 | 0 | 1 | 335 | 1074 | 1408 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 33500 | 614 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18845577 | 18845577 | PRJEB65329_S_NODE_5255_length_352_cov_10.417957_g5093_i0 | PRJEB65329 | 5255 | 352 | 10.417957 | 36.67120864 | Mus | 10088 | Chordata | Chordata | 651 | 0 | NTclustered | gi|846387676|dbj|LC061971.1| | 10090 | g5093 | i0 | 100 | 100 | 352 | 0 | 100 | 0 | 1 | 352 | 1736 | 1385 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_20 | blastn | 35200 | 651 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19255775 | 19255775 | PRJEB65329_S_NODE_6056_length_312_cov_7.187279_g5894_i0 | PRJEB65329 | 6056 | 312 | 7.187279 | 22.42431048 | Nanorana parkeri | 125878 | Chordata | Chordata | 52.8 | 0.029 | NTclustered | gi|1072260738|ref|XM_018560163.1| | 125878 | g5894 | i0 | 100 | 0.269230769230769 | 28 | 0 | 9 | 0 | 104 | 131 | 3889 | 3916 | PREDICTED: Nanorana parkeri mediator complex subunit 1 (MED1), transcript variant X1, mRNA | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Dicroglossidae | Nanorana | Nanorana parkeri | |
| 20531193 | 20531193 | PRJEB65329_S_NODE_7157_length_276_cov_2.676113_g6995_i0 | PRJEB65329 | 7157 | 276 | 2.676113 | 7.38607188 | Mus musculus | 10090 | Chordata | Chordata | 510 | 3.48e-140 | NTclustered | gi|74208799|dbj|AK132429.1| | 10090 | g6995 | i0 | 100 | 87.1775362318841 | 276 | 0 | 100 | 0 | 1 | 276 | 2339 | 2064 | Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632416A11 product:periaxin, full insert sequence | blastn | 24061 | 510 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21396039 | 21396039 | PRJEB65329_S_NODE_13377_length_181_cov_2.690789_g13215_i0 | PRJEB65329 | 13377 | 181 | 2.690789 | 4.87032809 | Mus | 10088 | Chordata | Chordata | 333 | 4.9000000000000015e-87 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g13215 | i0 | 100 | 99.4475138121547 | 180 | 0 | 99 | 0 | 2 | 181 | 13213 | 13034 | Mus musculus strain ME mitochondrion, complete genome | blastn | 18000 | 333 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21396045 | 21396045 | PRJEB65329_S_NODE_14997_length_169_cov_2.335714_g14835_i0 | PRJEB65329 | 14997 | 169 | 2.335714 | 3.94735666 | Lampetra | 13103 | Chordata | Chordata | 54.7 | 0.004 | NTclustered | gi|2805735122|emb|OZ078430.1| | 7748 | g14835 | i0 | 96.875 | 0.378698224852071 | 32 | 1 | 19 | 0 | 94 | 125 | 2590689 | 2590720 | Lampetra fluviatilis genome assembly, chromosome: 27 | blastn | 64 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra fluviatilis | |
| 21396074 | 21396074 | PRJEB65329_S_NODE_8937_length_236_cov_1.782609_g8775_i0 | PRJEB65329 | 8937 | 236 | 1.782609 | 4.20695724 | root | 1 | Root_unresolved | Root_unresolved | 435 | 1.8e-117 | NTclustered | gi|919185050|ref|NM_009976.4| | 10090 | g8775 | i0 | 100 | 77.7330508474576 | 235 | 0 | 99 | 0 | 2 | 236 | 478 | 244 | Mus musculus cystatin C (Cst3), mRNA | blastn | 18345 | 435 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21806937 | 21806937 | PRJEB65329_S_NODE_5038_length_367_cov_3.218935_g4876_i0 | PRJEB65329 | 5038 | 367 | 3.218935 | 11.81349145 | Mus musculus | 10090 | Chordata | Chordata | 678 | 0 | NTclustered | gi|53668|emb|X53929.1| | 10090 | g4876 | i0 | 100 | 99.4277929155313 | 367 | 0 | 100 | 0 | 1 | 367 | 272 | 638 | M.musculus mRNA for PGII (decorin) | blastn | 36490 | 678 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22670816 | 22670816 | PRJEB65329_S_NODE_15418_length_166_cov_3.226277_g15256_i0 | PRJEB65329 | 15418 | 166 | 3.226277 | 5.35561982 | Opisthokonta | 33154 | Chordata | Chordata | 52.8 | 0.014 | NTclustered | gi|1679848544|ref|XR_002378167.2| | 10089 | g15256 | i0 | 100 | 0.506024096385542 | 28 | 0 | 17 | 0 | 85 | 112 | 1484 | 1457 | PREDICTED: Mus caroli uncharacterized LOC110296255 (LOC110296255), transcript variant X1, ncRNA | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 22670819 | 22670819 | PRJEB65329_S_NODE_16058_length_162_cov_3.962406_g15896_i0 | PRJEB65329 | 16058 | 162 | 3.962406 | 6.41909772 | Mus | 10088 | Chordata | Chordata | 300 | 4.36e-77 | NTclustered | gi|846387457|dbj|LC061936.1| | 10090 | g15896 | i0 | 100 | 100 | 162 | 0 | 100 | 0 | 1 | 162 | 115 | 276 | Mus musculus mitochondrion DNA, including ND2, tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, tRNA-Tyr, COX1 genes, complete sequence, sequence_id: (4078..6548)_6 | blastn | 16200 | 300 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 23081996 | 23081996 | PRJEB65329_S_NODE_17479_length_155_cov_2.388889_g17317_i0 | PRJEB65329 | 17479 | 155 | 2.388889 | 3.70277795 | Mus musculus | 10090 | Chordata | Chordata | 287 | 3.21e-73 | NTclustered | gi|74208799|dbj|AK132429.1| | 10090 | g17317 | i0 | 100 | 40 | 155 | 0 | 100 | 0 | 1 | 155 | 3803 | 3957 | Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632416A11 product:periaxin, full insert sequence | blastn | 6200 | 287 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 23082007 | 23082007 | PRJEB65329_S_NODE_18259_length_151_cov_4.131148_g18097_i0 | PRJEB65329 | 18259 | 151 | 4.131148 | 6.23803348 | Ammospiza nelsoni | 2857394 | Chordata | Chordata | 52.8 | 0.012 | NTclustered | gi|2578459227|ref|XM_059489594.1| | 2857394 | g18097 | i0 | 100 | 0.185430463576159 | 28 | 0 | 19 | 0 | 1 | 28 | 1391 | 1364 | PREDICTED: Ammospiza nelsoni unc-13 homolog A (UNC13A), mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Passerellidae | Ammospiza | Ammospiza nelsoni | |
| 23946357 | 23946357 | PRJEB65329_S_NODE_5799_length_325_cov_3.479730_g5637_i0 | PRJEB65329 | 5799 | 325 | 3.47973 | 11.3091225 | Mus | 10088 | Chordata | Chordata | 601 | 2.4199999999999993e-167 | NTclustered | gi|74191669|dbj|AK151443.1| | 10090 | g5637 | i0 | 100 | 68.1538461538462 | 325 | 0 | 100 | 0 | 1 | 325 | 676 | 352 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030D12 product:CD9 antigen, full insert sequence | blastn | 22150 | 601 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24356108 | 24356108 | PRJEB65329_S_NODE_9680_length_223_cov_3.654639_g9518_i0 | PRJEB65329 | 9680 | 223 | 3.654639 | 8.14984497 | Mus musculus | 10090 | Chordata | Chordata | 412 | 7.88e-111 | NTclustered | gi|12832103|dbj|AK002253.1| | 10090 | g9518 | i0 | 100 | 99.3363228699552 | 223 | 0 | 100 | 0 | 1 | 223 | 232 | 10 | Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610006K08 product:ferritin light chain 1, full insert sequence | blastn | 22152 | 412 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 25220037 | 25220037 | PRJEB65329_S_NODE_6420_length_298_cov_5.535316_g6258_i0 | PRJEB65329 | 6420 | 298 | 5.535316 | 16.49524168 | Mus | 10088 | Chordata | Chordata | 551 | 2.239999999999999e-152 | NTclustered | gi|2746383783|gb|PP914380.1| | 10090 | g6258 | i0 | 100 | 100 | 298 | 0 | 100 | 0 | 1 | 298 | 1122 | 825 | Mus musculus isolate SK2917 cytochrome b (CYTB) gene, partial cds; mitochondrial | blastn | 29800 | 551 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 25220041 | 25220041 | PRJEB65329_S_NODE_7380_length_270_cov_1.784232_g7218_i0 | PRJEB65329 | 7380 | 270 | 1.784232 | 4.8174264 | Mus | 10088 | Chordata | Chordata | 499 | 7.349999999999998e-137 | NTclustered | gi|74187367|dbj|AK161977.1| | 10090 | g7218 | i0 | 100 | 20.262962962963 | 270 | 0 | 100 | 0 | 1 | 270 | 2335 | 2066 | Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530420N11 product:phosphoprotein enriched in astrocytes 15, full insert sequence | blastn | 5471 | 499 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 25220050 | 25220050 | PRJEB65329_S_NODE_9380_length_228_cov_3.407035_g9218_i0 | PRJEB65329 | 9380 | 228 | 3.407035 | 7.7680398 | Mus | 10088 | Chordata | Chordata | 422 | 1.34e-113 | NTclustered | gi|846387457|dbj|LC061936.1| | 10090 | g9218 | i0 | 100 | 100 | 228 | 0 | 100 | 0 | 1 | 228 | 382 | 609 | Mus musculus mitochondrion DNA, including ND2, tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, tRNA-Tyr, COX1 genes, complete sequence, sequence_id: (4078..6548)_6 | blastn | 22800 | 422 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 27128321 | 27128321 | PRJEB65329_S_NODE_14722_length_171_cov_2.281690_g14560_i0 | PRJEB65329 | 14722 | 171 | 2.28169 | 3.9016899 | Bufo gargarizans | 30331 | Chordata | Chordata | 42 | 0.0263 | NR | XP_044151373.1 | 30331 | g14560 | i0 | 52.5 | 0.701754385964912 | 40 | 16 | 68.4 | 2 | 169 | 53 | 293 | 330 | XP_044151373.1 LOW QUALITY PROTEIN: RING finger protein 37 [Bufo gargarizans] | diamond | 120 | 42 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Bufonidae | Bufo | Bufo gargarizans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;