RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB65329" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB65329 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11197229 11197229 PRJEB65329_S_NODE_12669_length_187_cov_4.373418_g12507_i0 PRJEB65329 12669 187 4.373418 8.17829166 Opisthokonta 33154 Fungi Fungi 58.4 3.44e-4   NTclustered gi|2325054217|ref|XM_051746181.1| 936130 g12507 i0 100 2.58288770053476 31 0 17 0 157 187 842 812 Pisolithus orientalis uncharacterized protein (F5J12DRAFT_842939), mRNA blastn 483 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Pisolithaceae Pisolithus Pisolithus orientalis
12472853 12472853 PRJEB65329_S_NODE_12830_length_186_cov_2.350318_g12668_i0 PRJEB65329 12830 186 2.350318 4.37159148 Eukaryota 2759 Fungi Fungi 344 2.34e-90   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g12668 i0 100 97.8817204301075 186 0 100 0 1 186 1652 1467 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 18206 344 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17571770 17571770 PRJEB65329_S_NODE_13014_length_184_cov_2.954839_g12852_i0 PRJEB65329 13014 184 2.954839 5.43690376 Opisthokonta 33154 Fungi Fungi 340 2.99e-89   NTclustered gi|915512607|gb|KP825390.1| 76775 g12852 i0 100 100 184 0 100 0 1 184 228 411 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 18400 340 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
21396049 21396049 PRJEB65329_S_NODE_16657_length_159_cov_2.700000_g16495_i0 PRJEB65329 16657 159 2.7 4.293 Malassezia 55193 Fungi Fungi 294 1.98e-75   NTclustered gi|915512619|gb|KP825402.1| 76775 g16495 i0 100 98.7169811320755 159 0 100 0 1 159 178 20 Malassezia restricta strain ISOSEB46F 28S ribosomal RNA gene, partial sequence blastn 15696 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24356060 24356060 PRJEB65329_S_NODE_7280_length_272_cov_4.427984_g7118_i0 PRJEB65329 7280 272 4.427984 12.04411648 Rhodonia placenta 104341 Fungi Fungi 56.5 0.002   NTclustered gi|1372285726|ref|XM_024482125.1| 670580 g7118 i0 94.444 0.338235294117647 36 2 13 0 1 36 916 881 Postia placenta MAD-698-R-SB12 hypothetical protein (POSPLADRAFT_1066951), mRNA blastn 92 56.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Adustoporiaceae Rhodonia Rhodonia placenta
27191830 27191830 PRJEB65329_S_NODE_15182_length_168_cov_2.079137_g15020_i0 PRJEB65329 15182 168 2.079137 3.49295016 Mixia osmundae IAM 14324 764103 Fungi Fungi 73.9 1.37e-13   NR XP_014565237.1 764103 g15020 i0 56.4 8.35714285714286 55 24 98.2 0 4 168 90 144 XP_014565237.1 uncharacterized protein L969DRAFT_97070 [Mixia osmundae IAM 14324] diamond 1404 73.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Mixiomycetes Mixiales Mixiaceae Mixia Mixia osmundae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;