RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB65329" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB65329 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10333277 10333277 PRJEB65329_S_NODE_7129_length_277_cov_2.197581_g6967_i0 PRJEB65329 7129 277 2.197581 6.08729937 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 165 5.21e-50   NR GFH52366.1 426638 g6967 i0 86.8 9.76895306859206 91 11 98.6 1 275 3 56 145 GFH52366.1 small subunit ribosomal protein S11e [Chaetoceros tenuissimus] diamond 2706 165 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;