contig_metadata
22 rows where bioproject = "PRJEB65329" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2269156 | 2269156 | PRJEB65329_S_NODE_8962_length_235_cov_3.383495_g8800_i0 | PRJEB65329 | 8962 | 235 | 3.383495 | 7.95121325 | Streptomycetaceae | 2062 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|1399240079|gb|CP029788.1| | 1885 | g8800 | i0 | 100 | 4.40851063829787 | 28 | 0 | 12 | 0 | 70 | 97 | 5092073 | 5092046 | Streptomyces actuosus strain ATCC 25421 chromosome, complete genome | blastn | 1036 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces actuosus | ||
| 4821986 | 4821986 | PRJEB65329_S_NODE_9604_length_224_cov_5.876923_g9442_i0 | PRJEB65329 | 9604 | 224 | 5.876923 | 13.16430752 | Corynebacterium | 1716 | Bacteria | Bacteria | 364 | 2.2499999999999993e-96 | NTclustered | gi|2443264930|gb|CP063195.1| | 38289 | g9442 | i0 | 95.982 | 431.620535714286 | 224 | 9 | 100 | 0 | 1 | 224 | 110827 | 111050 | Corynebacterium jeikeium strain DSM 7171 chromosome, complete genome | blastn | 96683 | 364 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium jeikeium | ||
| 5232609 | 5232609 | PRJEB65329_S_NODE_16845_length_158_cov_2.689922_g16683_i0 | PRJEB65329 | 16845 | 158 | 2.689922 | 4.25007676 | Protaetiibacter larvae | 2592654 | Bacteria | Bacteria | 122 | 9.809999999999999e-24 | NTclustered | gi|1736209585|gb|CP043504.1| | 2592654 | g16683 | i0 | 84.553 | 68.2025316455696 | 123 | 19 | 78 | 0 | 28 | 150 | 544062 | 543940 | Protaetiibacter larvae strain KACC 19322 chromosome, complete genome | blastn | 10776 | 122 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Protaetiibacter | Protaetiibacter larvae | ||
| 6097075 | 6097075 | PRJEB65329_S_NODE_17805_length_153_cov_4.733871_g17643_i0 | PRJEB65329 | 17805 | 153 | 4.733871 | 7.24282263 | root | 1 | Root_unresolved | Root_unresolved | 283 | 4.0799999999999995e-72 | NTclustered | gi|1796972337|gb|CP033085.1| | 1280 | g17643 | i0 | 100 | 55.5751633986928 | 153 | 0 | 100 | 0 | 1 | 153 | 2681137 | 2681289 | Staphylococcus aureus strain WH3018 chromosome | blastn | 8503 | 283 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 8647006 | 8647006 | PRJEB65329_S_NODE_4767_length_383_cov_7.228814_g4605_i0 | PRJEB65329 | 4767 | 383 | 7.228814 | 27.68635762 | Cutibacterium | 1912216 | Bacteria | Bacteria | 520 | 8.33e-143 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4605 | i0 | 96.519 | 212.997389033943 | 316 | 7 | 82 | 4 | 1 | 314 | 55360 | 55673 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 81578 | 520 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 10333106 | 10333106 | PRJEB65329_S_NODE_17729_length_154_cov_2.072000_g17567_i0 | PRJEB65329 | 17729 | 154 | 2.072 | 3.19088 | Streptomyces hygroscopicus | 1912 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|2209700036|dbj|AP025668.1| | 1912 | g17567 | i0 | 100 | 0.181818181818182 | 28 | 0 | 18 | 0 | 120 | 147 | 5180060 | 5180033 | Streptomyces hygroscopicus HOK021 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces hygroscopicus | ||
| 11197244 | 11197244 | PRJEB65329_S_NODE_1849_length_740_cov_5.890295_g536_i2 | PRJEB65329 | 1849 | 740 | 5.890295 | 43.588183 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1245 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g536 | i2 | 97.027 | 281.868918918919 | 740 | 22 | 100 | 0 | 1 | 740 | 608304 | 609043 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 208583 | 1245 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 11197265 | 11197265 | PRJEB65329_S_NODE_569_length_1251_cov_6.440262_g536_i0 | PRJEB65329 | 569 | 1251 | 6.440262 | 80.56767762 | Cutibacterium | 1912216 | Bacteria | Bacteria | 2296 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g536 | i0 | 99.84 | 276.338129496403 | 1249 | 2 | 99 | 0 | 1 | 1249 | 609043 | 607795 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 345699 | 2296 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13747367 | 13747367 | PRJEB65329_S_NODE_811_length_1082_cov_6.650522_g536_i1 | PRJEB65329 | 811 | 1082 | 6.650522 | 71.95864804 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1840 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g536 | i1 | 97.415 | 277.462107208872 | 1083 | 22 | 99 | 6 | 1 | 1081 | 57410 | 56332 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 300214 | 1840 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 14158447 | 14158447 | PRJEB65329_S_NODE_14772_length_170_cov_4.787234_g14610_i0 | PRJEB65329 | 14772 | 170 | 4.787234 | 8.1382978 | Actinomadura madurae | 1993 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2893341638|gb|CP083237.1| | 1993 | g14610 | i0 | 96.97 | 0.547058823529412 | 33 | 1 | 19 | 0 | 1 | 33 | 9641251 | 9641219 | Actinomadura madurae strain ATCC 19425 chromosome, complete genome | blastn | 93 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Thermomonosporaceae | Actinomadura | Actinomadura madurae | ||
| 15432637 | 15432637 | PRJEB65329_S_NODE_7133_length_276_cov_4.562753_g6971_i0 | PRJEB65329 | 7133 | 276 | 4.562753 | 12.59319828 | root | 1 | Root_unresolved | Root_unresolved | 174 | 1.16e-52 | NR | WP_321130271.1 | 1496 | g6971 | i0 | 92.4 | 2 | 92 | 7 | 100 | 0 | 276 | 1 | 99 | 190 | WP_321130271.1 GTP-binding protein, partial [Clostridioides difficile] | diamond | 552 | 174 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 17571766 | 17571766 | PRJEB65329_S_NODE_12554_length_188_cov_8.930818_g12392_i0 | PRJEB65329 | 12554 | 188 | 8.930818 | 16.78993784 | Corynebacterium | 1716 | Bacteria | Bacteria | 348 | 1.84e-91 | NTclustered | gi|2182362215|gb|CP040520.1| | 1717 | g12392 | i0 | 100 | 125 | 188 | 0 | 100 | 0 | 1 | 188 | 2405045 | 2404858 | Corynebacterium diphtheriae strain CD1040 chromosome, complete genome | blastn | 23500 | 348 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium diphtheriae | ||
| 17981828 | 17981828 | PRJEB65329_S_NODE_9055_length_233_cov_8.794118_g8893_i0 | PRJEB65329 | 9055 | 233 | 8.794118 | 20.49029494 | uncultured Corynebacterium sp. | 159447 | Bacteria | Bacteria | 431 | 2.2899999999999996e-116 | NTclustered | gi|407954676|dbj|AB587853.1| | 159447 | g8893 | i0 | 100 | 100 | 233 | 0 | 100 | 0 | 1 | 233 | 305 | 73 | Uncultured Corynebacterium sp. gene for 16S ribosomal RNA, partial sequence, clone: PT-E1 | blastn | 23300 | 431 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | uncultured Corynebacterium sp. | ||
| 20120487 | 20120487 | PRJEB65329_S_NODE_6796_length_286_cov_3.587549_g6634_i0 | PRJEB65329 | 6796 | 286 | 3.587549 | 10.26039014 | Corynebacterium | 1716 | Bacteria | Bacteria | 496 | 1.02e-135 | NTclustered | gi|2443264930|gb|CP063195.1| | 38289 | g6634 | i0 | 97.902 | 435.636363636364 | 286 | 6 | 100 | 0 | 1 | 286 | 110192 | 110477 | Corynebacterium jeikeium strain DSM 7171 chromosome, complete genome | blastn | 124592 | 496 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium jeikeium | ||
| 23946356 | 23946356 | PRJEB65329_S_NODE_5559_length_336_cov_3.726384_g5397_i0 | PRJEB65329 | 5559 | 336 | 3.726384 | 12.52065024 | Cutibacterium | 1912216 | Bacteria | Bacteria | 475 | 1.5899999999999995e-129 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g5397 | i0 | 92.492 | 318.03869047619 | 333 | 23 | 99 | 2 | 1 | 331 | 609043 | 608711 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 106861 | 475 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 25220019 | 25220019 | PRJEB65329_S_NODE_17240_length_156_cov_2.700787_g17078_i0 | PRJEB65329 | 17240 | 156 | 2.700787 | 4.21322772 | Streptomyces | 1883 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2655774549|gb|CP109243.1| | 1886 | g17078 | i0 | 100 | 10.0384615384615 | 29 | 0 | 19 | 0 | 74 | 102 | 5996893 | 5996921 | Streptomyces albidoflavus strain NBC 01661 chromosome, complete genome | blastn | 1566 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces albidoflavus | ||
| 27058514 | 27058514 | PRJEB65329_S_NODE_18302_length_151_cov_2.934426_g18140_i0 | PRJEB65329 | 18302 | 151 | 2.934426 | 4.43098326 | root | 1 | Root_unresolved | Root_unresolved | 90.1 | 8.480000000000001e-21 | NR | MCJ0157548.1 | 1496 | g18140 | i0 | 76 | 13.8675496688742 | 50 | 12 | 99.3 | 0 | 150 | 1 | 99 | 148 | MCJ0157548.1 40S ribosomal protein S3a/S1 [Clostridioides difficile] | diamond | 2094 | 90.9 | 0.991199119911991 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 27508117 | 27508117 | PRJEB65329_S_NODE_17743_length_154_cov_2.016000_g17581_i0 | PRJEB65329 | 17743 | 154 | 2.016 | 3.10464 | Cyanobium sp. ELA507 | 3064509 | Bacteria | Bacteria | 38.5 | 0.0448 | NR | MEI6617027.1 | 3064509 | g17581 | i0 | 50 | 0.701298701298701 | 36 | 15 | 64.3 | 1 | 123 | 25 | 1 | 36 | MEI6617027.1 MBL fold metallo-hydrolase [Cyanobium sp. ELA507] | diamond | 108 | 38.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Prochlorococcaceae | Cyanobium | Cyanobium sp. ELA507 | |
| 28613012 | 28613012 | PRJEB65329_S_NODE_13247_length_182_cov_2.784314_g13085_i0 | PRJEB65329 | 13247 | 182 | 2.784314 | 5.06745148 | Thermogemmatispora sp. | 1968838 | Bacteria | Bacteria | 41.6 | 0.0419 | NR | WP_376797019.1 | 1968838 | g13085 | i0 | 38.2 | 0.906593406593407 | 55 | 18 | 87.4 | 2 | 24 | 182 | 82 | 122 | WP_376797019.1 zinc-binding alcohol dehydrogenase family protein [Thermogemmatispora sp.] | diamond | 165 | 41.6 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Thermogemmatisporales | Thermogemmatisporaceae | Thermogemmatispora | Thermogemmatispora sp. | ||
| 29654525 | 29654525 | PRJEB65329_S_NODE_12650_length_188_cov_1.886792_g12488_i0 | PRJEB65329 | 12650 | 188 | 1.886792 | 3.54716896 | Streptomyces caniscabiei | 2746961 | Bacteria | Bacteria | 41.2 | 0.0372 | NR | WP_319106296.1 | 2746961 | g12488 | i0 | 47.2 | 0.574468085106383 | 36 | 19 | 57.4 | 0 | 171 | 64 | 37 | 72 | WP_319106296.1 peptidase inhibitor family I36 protein [Streptomyces caniscabiei] | diamond | 108 | 41.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces caniscabiei | ||
| 30855383 | 30855383 | PRJEB65329_S_NODE_9034_length_234_cov_2.702439_g8872_i0 | PRJEB65329 | 9034 | 234 | 2.702439 | 6.32370726 | Streptomyces sp. KM77-8 | 3074435 | Bacteria | Bacteria | 44.3 | 0.00927 | NR | BFO18157.1 | 3074435 | g8872 | i0 | 40 | 0.897435897435897 | 70 | 39 | 89.7 | 1 | 211 | 2 | 421 | 487 | BFO18157.1 hypothetical protein SHKM778_45450 [Streptomyces sp. KM77-8] | diamond | 210 | 44.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces haneummycinicus | ||
| 32846572 | 32846572 | PRJEB65329_S_NODE_12060_length_193_cov_4.310976_g11898_i0 | PRJEB65329 | 12060 | 193 | 4.310976 | 8.32018368 | Paenibacillus woosongensis | 307580 | Bacteria | Bacteria | 40 | 0.0299 | NR | WP_306422036.1 | 307580 | g11898 | i0 | 44.2 | 0.808290155440414 | 52 | 26 | 77.7 | 2 | 26 | 175 | 1 | 51 | WP_306422036.1 hypothetical protein [Paenibacillus woosongensis] | diamond | 156 | 40 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus woosongensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;