RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB65329", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJEB65329 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9057286 9057286 PRJEB65329_S_NODE_13588_length_179_cov_3.973333_g13426_i0 PRJEB65329 13588 179 3.973333 7.11226607 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 52.8 0.015   NTclustered gi|290988345|ref|XM_002676836.1| 5762 g13426 i0 100 0.50279329608938494 28 0 16 0 24 51 522 495 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_67740), partial mRNA blastn 90 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11608520 11608520 PRJEB65329_S_NODE_11970_length_194_cov_3.696970_g11808_i0 PRJEB65329 11970 194 3.69697 7.1721218 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 213 7.26e-51   NTclustered gi|2031952651|emb|OD958771.1| 5763 g11808 i0 86.598 98.3865979381443 194 24 99 2 2 194 4986 5178 Naegleria fowleri Karachi_NF001 strain blastn 19087 213 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;