RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB65099" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB65099 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14158342 14158342 PRJEB65099_P_NODE_2392_length_377_cov_1.848684_g2287_i0 PRJEB65099 2392 377 1.848684 6.96953868 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 514 3.81e-141   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g2287 i0 91.667 153.708222811671 372 30 98 1 1 371 1857970 1857599 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 57948 514 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
30287075 30287075 PRJEB65099_P_NODE_6212_length_246_cov_0.895954_g6107_i0 PRJEB65099 6212 246 0.895954 2.20404684 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 104 8.499999999999999e-24   NR HYI22346.1 2952938 g6107 i0 73.2 1 82 22 100 0 1 246 676 757 HYI22346.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Limnocylindrales bacterium] diamond 246 104 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
31480907 31480907 PRJEB65099_P_NODE_4916_length_253_cov_0.866667_g4811_i0 PRJEB65099 4916 253 0.866667 2.19266751 Bacteria 2 Bacteria Bacteria 96.3 7.859999999999998e-24   NR MYH41099.1 2026724 g4811 i0 51.7 4.88537549407115 87 36 96 1 251 9 7 93 MYH41099.1 hypothetical protein [Chloroflexota bacterium] diamond 1236 96.7 0.995863495346432 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;