RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB65099", tax_kingdom = "Thermotogati" and tax_phylum = "Thermotogota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJEB65099 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20120442 20120442 PRJEB65099_P_NODE_5796_length_248_cov_0.891429_g5691_i0 PRJEB65099 5796 248 0.891429 2.21074392 Fervidobacterium 2422 Bacteria Bacteria 442 1.1399999999999995e-119   NTclustered gi|1829530204|gb|CP050868.1| 3022686 g5691 i0 99.184 4.97177419354839 245 2 99 0 4 248 924775 924531 Fervidobacterium pennivorans subsp. keratinolyticus strain T chromosome, complete genome blastn 1233 442 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium pennivorans
29213109 29213109 PRJEB65099_P_NODE_6189_length_246_cov_0.901734_g6084_i0 PRJEB65099 6189 246 0.901734 2.21826564 Fervidobacterium sp. 1871331 Bacteria Bacteria 70.9 4.06e-13   NR HUM45087.1 1871331 g6084 i0 43.4 0.926829268292683 76 43 92.7 0 228 1 55 130 HUM45087.1 DUF1833 family protein [Fervidobacterium sp.] diamond 228 70.9 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;