contig_metadata
24 rows where bioproject = "PRJEB64798" and tax_phylum = "Rhodothermota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1401840 | 1401840 | PRJEB64798_P_NODE_164422_length_181_cov_4.893939_g162656_i0 | PRJEB64798 | 164422 | 181 | 4.893939 | 8.85802959 | Salinibacter ruber | 146919 | Bacteria | Bacteria | 104 | 4.18e-18 | NTclustered | gi|1473073668|gb|CP030356.1| | 146919 | g162656 | i0 | 80.282 | 10.0220994475138 | 142 | 24 | 77 | 4 | 3 | 142 | 3537105 | 3537244 | Salinibacter ruber strain P18 chromosome, complete genome | blastn | 1814 | 104 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Salinibacteraceae | Salinibacter | Salinibacter ruber | |
| 2678609 | 2678609 | PRJEB64798_P_NODE_244163_length_153_cov_41.576923_g242397_i0 | PRJEB64798 | 244163 | 153 | 41.576923 | 63.61269219 | Rubrivirga sp. IMCC43871 | 3391575 | Bacteria | Bacteria | 69.4 | 1.24e-7 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g242397 | i0 | 95.349 | 10.7058823529412 | 43 | 2 | 28 | 0 | 110 | 152 | 808453 | 808411 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 1638 | 69.4 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 6096357 | 6096357 | PRJEB64798_P_NODE_211465_length_164_cov_4.504348_g209699_i0 | PRJEB64798 | 211465 | 164 | 4.504348 | 7.38713072 | Rubrivirga | 1434037 | Bacteria | Bacteria | 102 | 1.34e-17 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g209699 | i0 | 79.333 | 9.99390243902439 | 150 | 28 | 90 | 3 | 9 | 156 | 808236 | 808088 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 1639 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 7370807 | 7370807 | PRJEB64798_P_NODE_232846_length_157_cov_15.018519_g231080_i0 | PRJEB64798 | 232846 | 157 | 15.018519 | 23.57907483 | Rubrivirga | 1434037 | Bacteria | Bacteria | 204 | 3.38e-48 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g231080 | i0 | 90.85 | 384.101910828025 | 153 | 12 | 97 | 2 | 6 | 157 | 805855 | 806006 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 60304 | 204 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 9921373 | 9921373 | PRJEB64798_P_NODE_214388_length_163_cov_11.754386_g212622_i0 | PRJEB64798 | 214388 | 163 | 11.754386 | 19.15964918 | Rubrivirga | 1434037 | Bacteria | Bacteria | 265 | 1.6e-66 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g212622 | i0 | 96.835 | 408.588957055215 | 158 | 5 | 97 | 0 | 3 | 160 | 806632 | 806789 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 66600 | 265 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 10330279 | 10330279 | PRJEB64798_P_NODE_154749_length_186_cov_2.562044_g152983_i0 | PRJEB64798 | 154749 | 186 | 2.562044 | 4.76540184 | Rubrivirga sp. IMCC43871 | 3391575 | Bacteria | Bacteria | 281 | 1.86e-71 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g152983 | i0 | 94.505 | 194.44623655914 | 182 | 10 | 98 | 0 | 5 | 186 | 805344 | 805525 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 36167 | 281 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 11606778 | 11606778 | PRJEB64798_P_NODE_229650_length_159_cov_2.372727_g227884_i0 | PRJEB64798 | 229650 | 159 | 2.372727 | 3.77263593 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 172 | 9.689999999999999e-39 | NTclustered | gi|2874254104|emb|OY970187.1| | 2838334 | g227884 | i0 | 87.333 | 313.207547169811 | 150 | 19 | 94 | 0 | 9 | 158 | 1309431 | 1309282 | MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 | blastn | 49800 | 172 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 15021485 | 15021485 | PRJEB64798_P_NODE_53792_length_266_cov_13.847926_g52027_i0 | PRJEB64798 | 53792 | 266 | 13.847926 | 36.83548316 | Rhodothermus | 29548 | Bacteria | Bacteria | 178 | 3.849999999999999e-40 | NTclustered | gi|470485382|ref|NR_076698.1| | 29549 | g52027 | i0 | 79.478 | 144.003759398496 | 268 | 42 | 98 | 13 | 6 | 266 | 258 | 519 | Rhodothermus marinus strain DSM 4252 23S ribosomal RNA gene, complete sequence | blastn | 38305 | 178 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus marinus | |
| 16295842 | 16295842 | PRJEB64798_P_NODE_204213_length_166_cov_3.555556_g202447_i0 | PRJEB64798 | 204213 | 166 | 3.555556 | 5.90222296 | Rubrivirga | 1434037 | Bacteria | Bacteria | 117 | 4.86e-22 | NTclustered | gi|2890853429|gb|CP177355.1| | 3391575 | g202447 | i0 | 80.921 | 88.066265060241 | 152 | 26 | 90 | 3 | 7 | 156 | 808238 | 808088 | Rubrivirga sp. IMCC43871 chromosome, complete genome | blastn | 14619 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC43871 | |
| 17978472 | 17978472 | PRJEB64798_P_NODE_139735_length_193_cov_10.152778_g137969_i0 | PRJEB64798 | 139735 | 193 | 10.152778 | 19.59486154 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 141 | 3.45e-29 | NTclustered | gi|2874254104|emb|OY970187.1| | 2838334 | g137969 | i0 | 92.784 | 115.414507772021 | 97 | 7 | 50 | 0 | 97 | 193 | 1309288 | 1309192 | MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 | blastn | 22275 | 141 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 19253235 | 19253235 | PRJEB64798_P_NODE_187556_length_171_cov_4.557377_g185790_i0 | PRJEB64798 | 187556 | 171 | 4.557377 | 7.79311467 | Rhodothermus marinus | 29549 | Bacteria | Bacteria | 195 | 2.25e-45 | NTclustered | gi|345113873|gb|CP003030.1| | 762570 | g185790 | i0 | 87.135 | 1.22222222222222 | 171 | 22 | 100 | 0 | 1 | 171 | 16148 | 15978 | Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, complete sequence | blastn | 209 | 195 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus marinus | |
| 21395318 | 21395318 | PRJEB64798_P_NODE_211317_length_164_cov_4.973913_g209551_i0 | PRJEB64798 | 211317 | 164 | 4.973913 | 8.15721732 | Rhodothermus | 29548 | Bacteria | Bacteria | 270 | 3.4699999999999992e-68 | NTclustered | gi|470485382|ref|NR_076698.1| | 29549 | g209551 | i0 | 96.914 | 221.853658536585 | 162 | 3 | 98 | 2 | 1 | 161 | 1341 | 1181 | Rhodothermus marinus strain DSM 4252 23S ribosomal RNA gene, complete sequence | blastn | 36384 | 270 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermus | Rhodothermus marinus | |
| 23078680 | 23078680 | PRJEB64798_P_NODE_122459_length_204_cov_15.851613_g120693_i0 | PRJEB64798 | 122459 | 204 | 15.851613 | 32.33729052 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 257 | 3.51e-64 | NTclustered | gi|2518540634|emb|OX638295.1| | 2306054 | g120693 | i0 | 90 | 146.495098039216 | 200 | 19 | 98 | 1 | 6 | 204 | 370297 | 370496 | MAG: Rhodothermales bacterium isolate 379627e8-994f-481d-907a-dd5b185e1f88 genome assembly, chromosome: 1 | blastn | 29885 | 257 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 24353083 | 24353083 | PRJEB64798_P_NODE_159580_length_183_cov_14.559701_g157814_i0 | PRJEB64798 | 159580 | 183 | 14.559701 | 26.64425283 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 174 | 3.19e-39 | NTclustered | gi|2874254104|emb|OY970187.1| | 2838334 | g157814 | i0 | 85.976 | 56.9071038251366 | 164 | 21 | 89 | 2 | 18 | 180 | 1309274 | 1309436 | MAG: Rubricoccaceae bacterium isolate MFD03250.bin.2.52 genome assembly, chromosome: 1 | blastn | 10414 | 174 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 26622117 | 26622117 | PRJEB64798_P_NODE_163961_length_181_cov_8.537879_g162195_i0 | PRJEB64798 | 163961 | 181 | 8.537879 | 15.45356099 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 66.6 | 6.2e-11 | NR | MFT5516759.1 | 2306054 | g162195 | i0 | 50.9 | 1.85635359116022 | 55 | 27 | 91.2 | 0 | 8 | 172 | 60 | 114 | MFT5516759.1 hypothetical protein [Rhodothermales bacterium] | diamond | 336 | 66.6 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 27508051 | 27508051 | PRJEB64798_P_NODE_55883_length_261_cov_3.731132_g54118_i0 | PRJEB64798 | 55883 | 261 | 3.731132 | 9.73825452 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 52 | 1.76e-5 | NR | MDX1529966.1 | 2306054 | g54118 | i0 | 51 | 2.54022988505747 | 49 | 23 | 56.3 | 1 | 202 | 56 | 99 | 146 | MDX1529966.1 T9SS type A sorting domain-containing protein [Rhodothermales bacterium] | diamond | 663 | 52 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 28328689 | 28328689 | PRJEB64798_P_NODE_83086_length_213_cov_7.554878_g81320_i0 | PRJEB64798 | 83086 | 213 | 7.554878 | 16.09189014 | Rhodothermia bacterium | 2497633 | Bacteria | Bacteria | 45.4 | 0.00267 | NR | MBN8588274.1 | 2497633 | g81320 | i0 | 52.6 | 0.535211267605634 | 38 | 18 | 53.5 | 0 | 95 | 208 | 39 | 76 | MBN8588274.1 hypothetical protein [Rhodothermia bacterium] | diamond | 114 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermia bacterium | ||||
| 28543042 | 28543042 | PRJEB64798_P_NODE_97567_length_212_cov_3.625767_g95801_i0 | PRJEB64798 | 97567 | 212 | 3.625767 | 7.68662604 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 56.6 | 3.14e-7 | NR | MCA1803179.1 | 2026787 | g95801 | i0 | 75.9 | 3.41037735849057 | 29 | 7 | 41 | 0 | 8 | 94 | 225 | 253 | MCA1803179.1 primosomal protein N' [Rhodothermaceae bacterium] | diamond | 723 | 56.6 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermaceae | Rhodothermaceae bacterium | ||
| 28833867 | 28833867 | PRJEB64798_P_NODE_238448_length_155_cov_15.433962_g236682_i0 | PRJEB64798 | 238448 | 155 | 15.433962 | 23.9226411 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 52.8 | 3.22e-6 | NR | HMB93905.1 | 2306054 | g236682 | i0 | 47.9 | 0.929032258064516 | 48 | 25 | 92.9 | 0 | 148 | 5 | 13 | 60 | HMB93905.1 3-phosphoglycerate dehydrogenase family protein [Rhodothermales bacterium] | diamond | 144 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 29213046 | 29213046 | PRJEB64798_P_NODE_57449_length_257_cov_5.269231_g55684_i0 | PRJEB64798 | 57449 | 257 | 5.2692310000000004 | 13.54192367 | Rubrivirga sp. IMCC452 | 1885344 | Bacteria | Bacteria | 68.2 | 5e-11 | NR | WP_412061153.1 | 3391614 | g55684 | i0 | 61.5 | 0.607003891050584 | 52 | 20 | 60.7 | 0 | 163 | 8 | 96 | 147 | WP_412061153.1 CHRD domain-containing protein [Rubrivirga sp. IMCC45206] | diamond | 156 | 68.2 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubrivirga | Rubrivirga sp. IMCC45206 | |
| 29244446 | 29244446 | PRJEB64798_P_NODE_47429_length_285_cov_4.033898_g45664_i0 | PRJEB64798 | 47429 | 285 | 4.033898 | 11.4966093 | Rhodothermia bacterium | 2497633 | Bacteria | Bacteria | 53.5 | 6.92e-6 | NR | MBN8587674.1 | 2497633 | g45664 | i0 | 42.9 | 0.663157894736842 | 63 | 36 | 66.3 | 0 | 191 | 3 | 47 | 109 | MBN8587674.1 YARHG domain-containing protein [Rhodothermia bacterium] | diamond | 189 | 53.5 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermia bacterium | ||||
| 30191572 | 30191572 | PRJEB64798_P_NODE_142872_length_192_cov_2.454545_g141106_i0 | PRJEB64798 | 142872 | 192 | 2.454545 | 4.7127264 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 41.6 | 0.0489 | NR | MEZ4701686.1 | 2306054 | g141106 | i0 | 46.3 | 0.640625 | 41 | 21 | 62.5 | 1 | 121 | 2 | 26 | 66 | MEZ4701686.1 choice-of-anchor D domain-containing protein [Rhodothermales bacterium] | diamond | 123 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 30191615 | 30191615 | PRJEB64798_P_NODE_177232_length_175_cov_9.476190_g175466_i0 | PRJEB64798 | 177232 | 175 | 9.47619 | 16.5833325 | Rubricoccaceae bacterium | 2838334 | Bacteria | Bacteria | 82 | 2.15e-16 | NR | HEX9952616.1 | 2838334 | g175466 | i0 | 55.2 | 1.98857142857143 | 58 | 26 | 99.4 | 0 | 1 | 174 | 462 | 519 | HEX9952616.1 peptidase S9 [Rubricoccaceae bacterium] | diamond | 348 | 82 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rubricoccaceae | Rubricoccaceae bacterium | ||
| 30507754 | 30507754 | PRJEB64798_P_NODE_213333_length_164_cov_0.904348_g211567_i0 | PRJEB64798 | 213333 | 164 | 0.904348 | 1.48313072 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 91.7 | 4.71e-20 | NR | MFT5129571.1 | 2306054 | g211567 | i0 | 95.3 | 0.786585365853659 | 43 | 2 | 78.7 | 0 | 36 | 164 | 82 | 124 | MFT5129571.1 putative aminopeptidase FrvX [Rhodothermales bacterium] | diamond | 129 | 91.7 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;