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contig_metadata

7 rows where bioproject = "PRJEB64798" and tax_phylum = "Olpidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1402671 1402671 PRJEB64798_P_NODE_217922_length_162_cov_44.946903_g216156_i0 PRJEB64798 217922 162 44.946903 72.81398286 Olpidium brassicae 70189 Fungi Fungi 141 2.799999999999999e-29   NTclustered gi|311235549|ref|NG_027564.1| 70189 g216156 i0 84.932 98.6666666666667 146 15 90 5 3 148 2748 2610 Olpidium brassicae DUKE DUH0009361 28S rRNA gene, partial sequence; from reference material blastn 15984 141 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae
15429953 15429953 PRJEB64798_P_NODE_181273_length_174_cov_1.504000_g179507_i0 PRJEB64798 181273 174 1.504 2.61696 Olpidiomycetes 2202807 Fungi Fungi 99.8 1.17e-22   NR BAL15350.1 278681 g179507 i0 78.9 2.91379310344828 57 12 98.3 0 173 3 139 195 BAL15350.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 507 100 0.998 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
16705664 16705664 PRJEB64798_P_NODE_43794_length_297_cov_37.568548_g42029_i0 PRJEB64798 43794 297 37.568548 111.57858756 Olpidium brassicae 70189 Fungi Fungi 89.8 2.1e-13   NTclustered gi|311235549|ref|NG_027564.1| 70189 g42029 i0 98.039 243.053872053872 51 1 32 0 234 284 2655 2605 Olpidium brassicae DUKE DUH0009361 28S rRNA gene, partial sequence; from reference material blastn 72187 89.8 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae
27121387 27121387 PRJEB64798_P_NODE_52402_length_270_cov_5.461538_g50637_i0 PRJEB64798 52402 270 5.461538 14.7461526 Fungi 4751 Fungi Fungi 111 6.33e-29   NR KAG5463654.1 278681 g50637 i0 63.6 7.82222222222222 88 32 97.8 0 265 2 20 107 KAG5463654.1 MAG: ribosomal protein L18e/L15P, partial [Olpidium bornovanus] diamond 2112 112 0.991071428571429 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
27911071 27911071 PRJEB64798_P_NODE_50465_length_276_cov_2.057269_g48700_i0 PRJEB64798 50465 276 2.057269 5.67806244 Eukaryota 2759 Fungi Fungi 70.9 1.57e-12   NR KAG5455917.1 278681 g48700 i0 54 4.72826086956522 63 29 68.5 0 271 83 150 212 KAG5455917.1 MAG: ribosomal protein S7e-domain-containing protein [Olpidium bornovanus] diamond 1305 70.9 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28233639 28233639 PRJEB64798_P_NODE_171046_length_178_cov_4.573643_g169280_i0 PRJEB64798 171046 178 4.573643 8.14108454 Olpidium bornovanus 278681 Fungi Fungi 53.1 1.75e-6   NR KAG5458169.1 278681 g169280 i0 73.5 5.34269662921348 34 9 57.3 0 107 6 135 168 KAG5458169.1 MAG: 40S ribosomal protein S1 [Olpidium bornovanus] diamond 951 53.1 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
29363834 29363834 PRJEB64798_P_NODE_214289_length_163_cov_14.385965_g212523_i0 PRJEB64798 214289 163 14.385965 23.44912295 Fungi 4751 Fungi Fungi 72.4 2.1e-13   NR KAG5462119.1 278681 g212523 i0 64.7 17.0061349693252 51 18 93.9 0 155 3 28 78 KAG5462119.1 MAG: hypothetical protein BJ554DRAFT_5585, partial [Olpidium bornovanus] diamond 2772 72.8 0.994505494505495 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;