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contig_metadata

24 rows where bioproject = "PRJEB64798" and tax_phylum = "Foraminifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 24 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2268470 2268470 PRJEB64798_P_NODE_227982_length_159_cov_7.472727_g226216_i0 PRJEB64798 227982 159 7.472727 11.88163593 Rotaliida 29185 SAR_Eukaryotes SAR_Eukaryotes 244 2.02e-60   NTclustered gi|89475219|gb|DQ408638.1| 203410 g226216 i0 99.259 84.7169811320755 135 1 85 0 25 159 2096 2230 Islandiella sp. 2643 small subunit ribosomal RNA gene, complete sequence blastn 13470 246 0.991869918699187 Eukaryota Sar   Foraminifera   Rotaliida Cassidulinidae Islandiella Islandiella sp. 2643
2678693 2678693 PRJEB64798_P_NODE_25143_length_392_cov_48.507289_g23394_i0 PRJEB64798 25143 392 48.507289 190.14857288 Rotaliella elatiana 35210 SAR_Eukaryotes SAR_Eukaryotes 161 5.969999999999999e-35   NTclustered gi|643022|emb|X78521.1| 35210 g23394 i0 83.978 4.21173469387755 181 16 43 5 125 293 1999 1820 R.elatiana complete gene of large subunit rRNA blastn 1651 161 1 Eukaryota Sar   Foraminifera   Rotaliida Rotaliidae Rotaliella Rotaliella elatiana
3953464 3953464 PRJEB64798_P_NODE_167924_length_179_cov_18.976923_g166158_i0 PRJEB64798 167924 179 18.976923 33.96869217 Trochammina sp. 37356 SAR_Eukaryotes SAR_Eukaryotes 257 2.99e-64   NTclustered gi|619567|emb|Z30147.1| 37356 g166158 i0 95.122 71.6368715083799 164 7 91 1 1 163 1720 1557 T.sp. gene for 28S ribosomal RNA blastn 12823 257 1 Eukaryota Sar   Foraminifera   Textulariida Trochamminidae Trochammina Trochammina sp.
6096254 6096254 PRJEB64798_P_NODE_189345_length_170_cov_10.719008_g187579_i0 PRJEB64798 189345 170 10.719008 18.2223136 Rotaliida 29185 SAR_Eukaryotes SAR_Eukaryotes 145 2.28e-30   NTclustered gi|998623043|dbj|LC049322.1| 51039 g187579 i0 90.826 11.4823529411765 109 8 64 2 63 170 3107 3214 Neogloboquadrina dutertrei gene for 28S rRNA, partial sequence, isolate: 11-9-T89 blastn 1952 145 1 Eukaryota Sar   Foraminifera   Rotaliida Globorotaliidae Neogloboquadrina Neogloboquadrina dutertrei
6506852 6506852 PRJEB64798_P_NODE_27466_length_375_cov_16.773006_g25711_i0 PRJEB64798 27466 375 16.773006 62.8987725 Foraminifera environmental sample 185789 SAR_Eukaryotes SAR_Eukaryotes 370 8.679999999999999e-98   NTclustered gi|1132112364|emb|LT671580.1| 185789 g25711 i0 85.675 39.3653333333333 363 26 96 10 1 360 696 357 Foraminifera environmental sample partial 18S rRNA gene, isolate OTU33 blastn 14762 370 1 Eukaryota Sar   Foraminifera         Foraminifera environmental sample
9054790 9054790 PRJEB64798_P_NODE_177448_length_175_cov_6.833333_g175682_i0 PRJEB64798 177448 175 6.833333 11.95833275 Foraminifera sp. chocolate silver saccamminid 1415197 SAR_Eukaryotes SAR_Eukaryotes 187 3.8699999999999985e-43   NTclustered gi|745794572|gb|KF728632.1| 1415197 g175682 i0 87.654 77.36 162 18 92 2 1 161 347 187 Foraminifera sp. chocolate silver saccamminid clone CSS9 actin (act) gene, partial cds blastn 13538 187 1 Eukaryota Sar   Foraminifera         Foraminifera sp. chocolate silver saccamminid
10329613 10329613 PRJEB64798_P_NODE_115089_length_208_cov_26.031447_g113323_i0 PRJEB64798 115089 208 26.031447 54.14540976 Pulleniatina obliquiloculata 225066 SAR_Eukaryotes SAR_Eukaryotes 122 1.37e-23   NTclustered gi|998623046|dbj|LC049325.1| 225066 g113323 i0 94.937 8.67788461538461 79 3 38 1 125 202 1795 1717 Pulleniatina obliquiloculata gene for 28S rRNA, partial sequence, isolate: KH284 blastn 1805 122 1 Eukaryota Sar   Foraminifera   Rotaliida Pulleniatinidae Pulleniatina Pulleniatina obliquiloculata
11605696 11605696 PRJEB64798_P_NODE_157430_length_184_cov_22.407407_g155664_i0 PRJEB64798 157430 184 22.407407 41.22962888 Neoassilina ammonoides 378197 SAR_Eukaryotes SAR_Eukaryotes 167 5.37e-37   NTclustered gi|873754158|emb|LN851734.1| 378197 g155664 i0 94.545 49.0271739130435 110 3 59 3 59 166 416 524 Operculina ammonoides partial 28S rRNA gene, isolate 494, clone 1 blastn 9021 167 1 Eukaryota Sar   Foraminifera   Rotaliida Nummulitidae Neoassilina Neoassilina ammonoides
14158143 14158143 PRJEB64798_P_NODE_87052_length_212_cov_14.785276_g85286_i0 PRJEB64798 87052 212 14.785276 31.34478512 Neogloboquadrina dutertrei 51039 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.11e-9   NTclustered gi|998623043|dbj|LC049322.1| 51039 g85286 i0 87.143 17.6792452830189 70 5 31 3 147 212 4447 4516 Neogloboquadrina dutertrei gene for 28S rRNA, partial sequence, isolate: 11-9-T89 blastn 3748 76.8 1 Eukaryota Sar   Foraminifera   Rotaliida Globorotaliidae Neogloboquadrina Neogloboquadrina dutertrei
15431870 15431870 PRJEB64798_P_NODE_70053_length_231_cov_4.340659_g68288_i0 PRJEB64798 70053 231 4.340659 10.02692229 uncultured soil foraminiferan 760941 SAR_Eukaryotes SAR_Eukaryotes 206 1.5e-48   NTclustered gi|295640952|gb|GU433652.1| 760941 g68288 i0 99.123 49.7965367965368 114 1 49 0 118 231 719 832 Uncultured soil foraminiferan clone A3 small subunit ribosomal RNA gene, partial sequence blastn 11503 206 1 Eukaryota Sar   Foraminifera         uncultured soil foraminiferan
16296267 16296267 PRJEB64798_P_NODE_54593_length_264_cov_7.223256_g52828_i0 PRJEB64798 54593 264 7.223256 19.06939584 Rotaliida 29185 SAR_Eukaryotes SAR_Eukaryotes 233 8.02e-57   NTclustered gi|998623043|dbj|LC049322.1| 51039 g52828 i0 91.667 42.5757575757576 168 14 64 0 20 187 4199 4032 Neogloboquadrina dutertrei gene for 28S rRNA, partial sequence, isolate: 11-9-T89 blastn 11240 233 1 Eukaryota Sar   Foraminifera   Rotaliida Globorotaliidae Neogloboquadrina Neogloboquadrina dutertrei
18844822 18844822 PRJEB64798_P_NODE_206435_length_165_cov_354.870690_g204669_i0 PRJEB64798 206435 165 354.87069 585.5366385 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 250 4.5599999999999996e-62   NTclustered gi|550600769|gb|KF042530.1| 45993 g204669 i0 94.969 96.3090909090909 159 8 96 0 7 165 433 591 Haynesina germanica isolate 2733.1 small subunit ribosomal RNA gene, partial sequence blastn 15891 250 1 Eukaryota Sar   Foraminifera   Rotaliida Nonionidae Haynesina Haynesina germanica
21806468 21806468 PRJEB64798_P_NODE_86398_length_212_cov_50.576687_g84632_i0 PRJEB64798 86398 212 50.576687 107.22257644 Rotaliella elatiana 35210 SAR_Eukaryotes SAR_Eukaryotes 206 1.3499999999999999e-48   NTclustered gi|643022|emb|X78521.1| 35210 g84632 i0 95.349 20.6792452830189 129 6 61 0 7 135 2727 2855 R.elatiana complete gene of large subunit rRNA blastn 4384 206 1 Eukaryota Sar   Foraminifera   Rotaliida Rotaliidae Rotaliella Rotaliella elatiana
23079102 23079102 PRJEB64798_P_NODE_151839_length_187_cov_8.152174_g150073_i0 PRJEB64798 151839 187 8.152174 15.24456538 Vellaria sp. 12192 1238464 SAR_Eukaryotes SAR_Eukaryotes 152 1.5299999999999998e-32   NTclustered gi|559105585|emb|HE998684.1| 1238464 g150073 i0 90 66.2887700534759 120 9 64 2 67 186 1094 1210 Vellaria sp. 12192 partial 18s rRNA gene, isolate 12192 blastn 12396 152 1 Eukaryota Sar   Foraminifera     Allogromiidae Vellaria Vellaria sp. 12192
23945124 23945124 PRJEB64798_P_NODE_126119_length_200_cov_46.105960_g124353_i0 PRJEB64798 126119 200 46.10596 92.21192 Rotaliida 29185 SAR_Eukaryotes SAR_Eukaryotes 185 1.64e-42   NTclustered gi|157850718|gb|EU019718.1| 212506 g124353 i0 93.548 62.41 124 8 62 0 64 187 408 285 Bulimina aculeata clone BAE006 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12482 185 1 Eukaryota Sar   Foraminifera   Rotaliida Buliminidae Bulimina Bulimina aculeata
26844127 26844127 PRJEB64798_P_NODE_238921_length_155_cov_8.216981_g237155_i0 PRJEB64798 238921 155 8.216981 12.73632055 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 84 2.78e-17   NR ETO29104.1 46433 g237155 i0 73.5 0.948387096774194 49 13 94.8 0 154 8 238 286 ETO29104.1 hypothetical protein RFI_08022 [Reticulomyxa filosa] diamond 147 84 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27279815 27279815 PRJEB64798_P_NODE_222443_length_161_cov_11.803571_g220677_i0 PRJEB64798 222443 161 11.803571 19.00374931 Ochromonadales 98652 SAR_Eukaryotes SAR_Eukaryotes 47.8 8.18e-5   NR ETO06965.1 46433 g220677 i0 54.3 1.45341614906832 35 16 65.2 0 106 2 109 143 ETO06965.1 hypothetical protein RFI_30425 [Reticulomyxa filosa] diamond 234 48.1 0.993762993762994 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27318285 27318285 PRJEB64798_P_NODE_122223_length_205_cov_2.070513_g120457_i0 PRJEB64798 122223 205 2.070513 4.24455165 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 82.8 1.56e-16   NR ETO29218.1 46433 g120457 i0 57.4 0.892682926829268 61 26 89.3 0 184 2 299 359 ETO29218.1 CCR4-NOT transcription complex subunit 8, partial [Reticulomyxa filosa] diamond 183 82.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27507907 27507907 PRJEB64798_P_NODE_17223_length_480_cov_8.559165_g15516_i0 PRJEB64798 17223 480 8.559165 41.083992 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 72.4 2.07e-11   NR ETO27996.1 46433 g15516 i0 34.6 0.66875 107 70 66.9 0 476 156 60 166 ETO27996.1 5'-3' exoribonuclease 1, partial [Reticulomyxa filosa] diamond 321 72.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28707747 28707747 PRJEB64798_P_NODE_250707_length_151_cov_11.666667_g248941_i0 PRJEB64798 250707 151 11.666667 17.61666717 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 55.8 2.42e-7   NR ETO10243.1 46433 g248941 i0 53.2 3.73509933774834 47 22 93.4 0 143 3 26 72 ETO10243.1 hypothetical protein RFI_27134, partial [Reticulomyxa filosa] diamond 564 55.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30002294 30002294 PRJEB64798_P_NODE_176411_length_176_cov_1.944882_g174645_i0 PRJEB64798 176411 176 1.944882 3.42299232 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 70.5 1.3e-12   NR ETO23157.1 46433 g174645 i0 63 0.920454545454545 54 20 92 0 10 171 144 197 ETO23157.1 putative hydrolase [Reticulomyxa filosa] diamond 162 70.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30128176 30128176 PRJEB64798_P_NODE_124592_length_202_cov_7.771242_g122826_i0 PRJEB64798 124592 202 7.771242 15.69790884 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 2.97e-9   NR ETO08387.1 46433 g122826 i0 74.3 2.73267326732673 35 9 52 0 5 109 55 89 ETO08387.1 S-Adenosyl homocysteine hydrolase [Reticulomyxa filosa] diamond 552 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30563671 30563671 PRJEB64798_P_NODE_213013_length_164_cov_1.391304_g211247_i0 PRJEB64798 213013 164 1.391304 2.28173856 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.8 5.15e-9   NR ETO33799.1 46433 g211247 i0 65 2.35975609756098 40 14 73.2 0 121 2 192 231 ETO33799.1 Protein kinase domain containing protein [Reticulomyxa filosa] diamond 387 60.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31107866 31107866 PRJEB64798_P_NODE_185435_length_172_cov_3.406504_g183669_i0 PRJEB64798 185435 172 3.406504 5.85918688 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 6.23e-9   NR ETO03611.1 46433 g183669 i0 55.3 0.819767441860465 47 21 82 0 146 6 176 222 ETO03611.1 translation initiation factor if-2 betam beta subunit ZnR [Reticulomyxa filosa] diamond 141 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;