RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB64798" and tax_phylum = "Candidatus Portnoyibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Portnoyibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28423572 28423572 PRJEB64798_P_NODE_224366_length_161_cov_2.482143_g222600_i0 PRJEB64798 224366 161 2.482143 3.99625023 Candidatus Portnoybacteria bacterium CG1 2053593 Bacteria Bacteria 41.6 0.0159   NR PJE60061.1 1974816 g222600 i0 60.6 0.614906832298137 33 13 61.5 0 60 158 83 115 PJE60061.1 MAG: hypothetical protein COU85_00230 [Candidatus Portnoybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_7] diamond 99 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_7
32500095 32500095 PRJEB64798_P_NODE_242339_length_154_cov_5.419048_g240573_i0 PRJEB64798 242339 154 5.419048 8.34533392 Candidatus Portnoybacteria bacterium CG1 2053593 Bacteria Bacteria 47.8 6.13e-5   NR PJE60061.1 1974816 g240573 i0 67.7 0.603896103896104 31 10 60.4 0 110 18 80 110 PJE60061.1 MAG: hypothetical protein COU85_00230 [Candidatus Portnoybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_7] diamond 93 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_7

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;