RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB64798" and tax_phylum = "Candidatus Kerfeldiibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kerfeldiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17979241 17979241 PRJEB64798_P_NODE_189475_length_170_cov_8.760331_g187709_i0 PRJEB64798 189475 170 8.760331 14.8925627 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 78.7 2.35e-10   NTclustered gi|2916314490|gb|CP181398.1| 2053565 g187709 i0 87.143 6.06470588235294 70 8 41 1 96 164 1042476 1042407 MAG: Candidatus Kerfeldbacteria bacterium isolate MKparc4 chromosome blastn 1031 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium
28612850 28612850 PRJEB64798_P_NODE_187827_length_171_cov_3.696721_g186061_i0 PRJEB64798 187827 171 3.696721 6.32139291 Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_48_17 1798542 Bacteria Bacteria 68.9 7.98e-12   NR OGY83724.1 1798542 g186061 i0 62.5 0.982456140350877 56 21 98.2 0 3 170 498 553 OGY83724.1 MAG: hypothetical protein A3F54_05070 [Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_48_17] diamond 168 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_48_17
32625922 32625922 PRJEB64798_P_NODE_152440_length_187_cov_3.942029_g150674_i0 PRJEB64798 152440 187 3.942029 7.37159423 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 43.1 0.0124   NR MBI3957040.1 2053565 g150674 i0 35.7 0.898395721925134 56 30 89.8 2 14 181 142 191 MBI3957040.1 WGR domain-containing protein [Candidatus Kerfeldbacteria bacterium] diamond 168 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;