RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB64798" and tax_phylum = "Candidatus Fervidibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6507302 6507302 PRJEB64798_P_NODE_49946_length_277_cov_7.263158_g48181_i0 PRJEB64798 49946 277 7.263158 20.11894766 Candidatus Fervidibacter sacchari 1448929 Bacteria Bacteria 69.4 2.53e-7   NTclustered gi|2551532584|gb|CP130454.1| 1448929 g48181 i0 84.507 0.256317689530686 71 9 26 2 37 107 329783 329715 Candidatus Fervidibacter sacchari strain PD1 chromosome, complete genome blastn 71 69.4 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sacchari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;