RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB64798" and tax_phylum = "Candidatus Bipolaricaulota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB64798 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23946025 23946025 PRJEB64798_P_NODE_57739_length_256_cov_12.173913_g55974_i0 PRJEB64798 57739 256 12.173913 31.16521728 Bacteria 2 Bacteria Bacteria 87.9 6.38e-13   NTclustered gi|1560905428|gb|CP034928.1| 2501609 g55974 i0 82.353 1.80078125 102 16 39 2 68 168 627680 627780 MAG: Candidatus Bipolaricaulis sibiricus isolate Ch78 chromosome, complete genome blastn 461 87.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis sibiricus
29086574 29086574 PRJEB64798_P_NODE_173128_length_177_cov_5.398438_g171362_i0 PRJEB64798 173128 177 5.398438 9.55523526 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 59.3 1.39e-8   NR MBS3736957.1 2306012 g171362 i0 53.6 3.28813559322034 56 24 94.9 1 9 176 2 55 MBS3736957.1 energy-coupling factor ABC transporter permease [Candidatus Bipolaricaulota bacterium] diamond 582 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
29812675 29812675 PRJEB64798_P_NODE_96771_length_212_cov_3.815951_g95005_i0 PRJEB64798 96771 212 3.815951 8.08981612 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 67.4 8.06e-12   NR HEC63183.1 2053493 g95005 i0 93.9 3.73584905660377 33 2 46.7 0 114 212 148 180 HEC63183.1 glutamate--tRNA ligase [Candidatus Acetothermia bacterium] diamond 792 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
32056922 32056922 PRJEB64798_P_NODE_47098_length_286_cov_3.898734_g45333_i0 PRJEB64798 47098 286 3.898734 11.15037924 Candidatus Bipolaricaulia bacterium 3121610 Bacteria Bacteria 44.3 0.0169   NR MFN4218807.1 3121610 g45333 i0 69 2.38111888111888 29 9 30.4 0 2 88 300 328 MFN4218807.1 spermidine/putrescine ABC transporter substrate-binding protein [Candidatus Bipolaricaulia bacterium] diamond 681 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia       Candidatus Bipolaricaulia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;