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contig_metadata

18 rows where bioproject = "PRJEB64798" and tax_phylum = "Brachiopoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB64798 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2677707 2677707 PRJEB64798_P_NODE_180703_length_174_cov_2.752000_g178937_i0 PRJEB64798 180703 174 2.752 4.78848 Metazoa 33208 Brachiopoda other_Eukaryota 97.8 4.8e-22   NR XP_013389396.1 7574 g178937 i0 76.8 14.4827586206897 56 13 96.6 0 168 1 416 471 XP_013389396.1 LOW QUALITY PROTEIN: protein disulfide-isomerase A3-like [Lingula anatina] diamond 2520 97.8 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
7780212 7780212 PRJEB64798_P_NODE_195427_length_168_cov_18.193277_g193661_i0 PRJEB64798 195427 168 18.193277 30.56470536 Novocrania anomala 317945 Brachiopoda other_Eukaryota 78.7 2.33e-10   NTclustered gi|188572442|gb|EU558324.1| 317945 g193661 i0 91.228 0.720238095238095 57 5 34 0 61 117 411 355 Novocrania anomala putative 60S ribosomal protein RPL27 mRNA, complete cds blastn 121 78.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Craniata Craniida Craniidae Novocrania Novocrania anomala
9055634 9055634 PRJEB64798_P_NODE_236688_length_156_cov_5.252336_g234922_i0 PRJEB64798 236688 156 5.252336 8.19364416 Novocrania anomala 317945 Brachiopoda other_Eukaryota 62.1 2.13e-5   NTclustered gi|188572412|gb|EU558309.1| 317945 g234922 i0 97.222 0.230769230769231 36 1 23 0 1 36 156 121 Novocrania anomala putative 60S ribosomal protein RPL7 mRNA, partial cds blastn 36 62.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Craniata Craniida Craniidae Novocrania Novocrania anomala
21805601 21805601 PRJEB64798_P_NODE_37638_length_322_cov_4.586081_g35878_i0 PRJEB64798 37638 322 4.586081 14.76718082 Lingula anatina 7574 Brachiopoda other_Eukaryota 195 4.7499999999999995e-45   NTclustered gi|1351337795|ref|XM_013546979.2| 7574 g35878 i0 89.542 41.1180124223603 153 16 48 0 129 281 1452 1300 PREDICTED: Lingula anatina tubulin alpha-1A chain (LOC106168052), mRNA blastn 13240 195 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26615139 26615139 PRJEB64798_P_NODE_16541_length_490_cov_3.312925_g14841_i0 PRJEB64798 16541 490 3.312925 16.2333325 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.3 7.09e-20   NR XP_013395991.1 7574 g14841 i0 36.4 11.8408163265306 129 75 75.9 2 464 93 266 392 XP_013395991.1 ornithine decarboxylase-like [Lingula anatina] diamond 5802 96.3 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26875835 26875835 PRJEB64798_P_NODE_201961_length_167_cov_0.881356_g200195_i0 PRJEB64798 201961 167 0.881356 1.47186452 Lingula anatina 7574 Brachiopoda other_Eukaryota 47.4 2.74e-4   NR XP_013412764.1 7574 g200195 i0 37 1.94011976047904 54 32 93.4 1 163 8 55 108 XP_013412764.1 COMM domain-containing protein 6 isoform X2 [Lingula anatina] diamond 324 47.4 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27065391 27065391 PRJEB64798_P_NODE_64762_length_241_cov_9.369792_g62997_i0 PRJEB64798 64762 241 9.369792 22.58119872 Lingula anatina 7574 Brachiopoda other_Eukaryota 124 3.21e-32   NR XP_013409929.1 7574 g62997 i0 75.3 1.91701244813278 77 19 95.9 0 231 1 91 167 XP_013409929.1 cathepsin B [Lingula anatina] diamond 462 124 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27349997 27349997 PRJEB64798_P_NODE_118923_length_207_cov_3.455696_g117157_i0 PRJEB64798 118923 207 3.455696 7.15329072 Lingula anatina 7574 Brachiopoda other_Eukaryota 70.1 5.37e-12   NR XP_013408704.1 7574 g117157 i0 52.5 3.72463768115942 61 29 88.4 0 189 7 67 127 XP_013408704.1 vigilin-like [Lingula anatina] diamond 771 70.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27602742 27602742 PRJEB64798_P_NODE_46724_length_287_cov_5.483193_g44959_i0 PRJEB64798 46724 287 5.483193 15.73676391 Lingula anatina 7574 Brachiopoda other_Eukaryota 44.7 0.0136   NR XP_013406430.1 7574 g44959 i0 31 1.53658536585366 84 49 82.6 4 3 239 642 721 XP_013406430.1 A disintegrin and metalloproteinase with thrombospondin motifs 7 isoform X1 [Lingula anatina] diamond 441 44.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29079652 29079652 PRJEB64798_P_NODE_81188_length_214_cov_4.084848_g79422_i0 PRJEB64798 81188 214 4.084848 8.74157472 Metazoa 33208 Brachiopoda other_Eukaryota 82 1.46e-16   NR XP_013396966.1 7574 g79422 i0 66.7 8.01869158878505 57 19 79.9 0 42 212 202 258 XP_013396966.1 60S acidic ribosomal protein P0-like [Lingula anatina] diamond 1716 82 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29086535 29086535 PRJEB64798_P_NODE_143448_length_191_cov_21.471831_g141682_i0 PRJEB64798 143448 191 21.471831 41.01119721 Lingula anatina 7574 Brachiopoda other_Eukaryota 44.3 0.00549   NR XP_023932585.1 7574 g141682 i0 39.6 4.03664921465969 48 27 72.3 1 52 189 290 337 XP_023932585.1 sperm-associated antigen 17 [Lingula anatina] diamond 771 44.3 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29496876 29496876 PRJEB64798_P_NODE_175110_length_176_cov_7.440945_g173344_i0 PRJEB64798 175110 176 7.440945 13.0960632 Lingula anatina 7574 Brachiopoda other_Eukaryota 66.6 3.39e-11   NR XP_013398583.1 7574 g173344 i0 63 1.6875 54 19 92 1 8 169 65 117 XP_013398583.1 transcription factor AP-1 [Lingula anatina] diamond 297 66.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29710639 29710639 PRJEB64798_P_NODE_170290_length_178_cov_12.860465_g168524_i0 PRJEB64798 170290 178 12.860465 22.8916277 Metazoa 33208 Brachiopoda other_Eukaryota 51.6 1.15e-5   NR XP_013401794.2 7574 g168524 i0 44.6 11.3426966292135 56 27 94.4 1 172 5 173 224 XP_013401794.2 DBH-like monooxygenase protein 1 [Lingula anatina] diamond 2019 51.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29812579 29812579 PRJEB64798_P_NODE_248031_length_152_cov_7.271845_g246265_i0 PRJEB64798 248031 152 7.271845 11.0532044 Lingula anatina 7574 Brachiopoda other_Eukaryota 48.1 1.34e-4   NR XP_013419198.1 7574 g246265 i0 51.4 0.690789473684211 35 17 69.1 0 125 21 875 909 XP_013419198.1 sushi domain-containing protein 2 [Lingula anatina] diamond 105 48.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30350320 30350320 PRJEB64798_P_NODE_253472_length_150_cov_5.683168_g251706_i0 PRJEB64798 253472 150 5.683168 8.524752 Lingula anatina 7574 Brachiopoda other_Eukaryota 96.3 1.17e-22   NR XP_013414049.1 7574 g251706 i0 75.5 2.94 49 12 98 0 148 2 200 248 XP_013414049.1 countin-1-like [Lingula anatina] diamond 441 96.3 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31480851 31480851 PRJEB64798_P_NODE_118556_length_207_cov_4.746835_g116790_i0 PRJEB64798 118556 207 4.746835 9.82594845 Metazoa 33208 Brachiopoda other_Eukaryota 85.1 2.76e-17   NR XP_023932407.1 7574 g116790 i0 70.7 5.17391304347826 58 15 84.1 1 179 6 4188 4243 XP_023932407.1 dynein heavy chain 3, axonemal [Lingula anatina] diamond 1071 85.9 0.990686845168801 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31487731 31487731 PRJEB64798_P_NODE_236976_length_156_cov_4.355140_g235210_i0 PRJEB64798 236976 156 4.35514 6.7940184 Lingula anatina 7574 Brachiopoda other_Eukaryota 48.5 1.02e-4   NR XP_013384673.1 7574 g235210 i0 47.1 0.980769230769231 51 27 98.1 0 2 154 483 533 XP_013384673.1 glucosylceramidase [Lingula anatina] diamond 153 48.5 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32814956 32814956 PRJEB64798_P_NODE_178280_length_175_cov_2.960317_g176514_i0 PRJEB64798 178280 175 2.960317 5.18055475 Lingula anatina 7574 Brachiopoda other_Eukaryota 45.8 0.00124   NR XP_013384833.1 7574 g176514 i0 32.7 0.891428571428571 52 35 89.1 0 165 10 550 601 XP_013384833.1 general transcription factor 3C polypeptide 1-like [Lingula anatina] diamond 156 45.8 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;