RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB64798", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 3 ✖

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26773710 26773710 PRJEB64798_P_NODE_240741_length_155_cov_2.566038_g238975_i0 PRJEB64798 240741 155 2.566038 3.9773589 Gammaretrovirus 153135 Viruses Viruses 99.4 1.29e-22   NR NP_057933.2 11801 g238975 i0 98 9.48387096774194 49 1 94.8 0 147 1 1171 1219 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1470 99.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
27381517 27381517 PRJEB64798_P_NODE_132843_length_197_cov_3.331081_g131077_i0 PRJEB64798 132843 197 3.331081 6.56222957 Retrovirus rattus8197 3117313 Viruses Viruses 42 0.0392   NR DBA47491.1 3117313 g131077 i0 43.8 0.974619289340102 32 18 48.7 0 59 154 567 598 DBA47491.1 MAG TPA_asm: Gag-Pol [Retrovirus rattus8197] diamond 192 42 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retrovirus rattus8197
31835113 31835113 PRJEB64798_P_NODE_124437_length_202_cov_16.320261_g122671_i0 PRJEB64798 124437 202 16.320261 32.96692722 Moloney murine leukemia virus 11801 Viruses Viruses 134 9.269999999999999e-35   NR NP_057933.2 11801 g122671 i0 98.5 4.9009900990099 66 1 98 0 3 200 661 726 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 990 134 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;