RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB64798", tax_clade = "Opisthokonta" and tax_phylum = "Entoprocta"

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tax_superkingdom 1

tax_phylum 1

  • Entoprocta · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB64798 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6507219 6507219 PRJEB64798_P_NODE_46086_length_289_cov_8.766667_g44321_i0 PRJEB64798 46086 289 8.766667 25.33566763 Loxosomella murmanica 231596 Entoprocta other_Eukaryota 115 3.36e-21   NTclustered gi|82622088|gb|DQ279950.1| 231596 g44321 i0 84.167 43.4913494809689 120 17 41 2 166 284 2825 2707 Loxosomella murmanica 28S ribosomal RNA gene, partial sequence blastn 12569 115 1 Eukaryota Opisthokonta Metazoa Entoprocta     Loxosomatidae Loxosomella Loxosomella murmanica
20120210 20120210 PRJEB64798_P_NODE_64716_length_241_cov_13.921875_g62951_i0 PRJEB64798 64716 241 13.921875 33.55171875 Metazoa 33208 Entoprocta other_Eukaryota 111 3.53e-20   NTclustered gi|37785569|gb|AY210456.1| 232741 g62951 i0 93.333 28.0995850622407 75 5 31 0 5 79 2916 2990 Bartensia gracilis 28S ribosomal RNA gene, partial sequence blastn 6772 111 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia gracilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;