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contig_metadata

23 rows where bioproject = "PRJEB64798", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 23 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 23 ✖

bioproject 1

  • PRJEB64798 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1403427 1403427 PRJEB64798_P_NODE_40222_length_311_cov_8.515267_g38458_i0 PRJEB64798 40222 311 8.515267 26.48248037 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 562 1.09e-155   NTclustered gi|2874253877|emb|OY969932.1| 176233 g38458 i0 99.674 146.385852090032 307 1 99 0 5 311 27715 27409 MAG: uncultured Methanobacteriaceae archaeon isolate MFD09286.bin.c.5 genome assembly, chromosome: 1 blastn 45526 562 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
2677121 2677121 PRJEB64798_P_NODE_141703_length_192_cov_9.930070_g139937_i0 PRJEB64798 141703 192 9.93007 19.0657344 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 340 3.15e-89   NTclustered gi|27552428|emb|AJ459882.1| 176233 g139937 i0 99.465 114.776041666667 187 1 97 0 6 192 1229 1415 Uncultured Methanobacteriaceae archaeon partial 16S rRNA gene, clone AEC 3 M71 blastn 22037 340 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
3954059 3954059 PRJEB64798_P_NODE_206504_length_165_cov_19.206897_g204738_i0 PRJEB64798 206504 165 19.206897 31.69138005 Methanotorris igneus 2189 Archaea Archaea 52.8 0.014   NTclustered gi|333750483|gb|CP002737.1| 880724 g204738 i0 94.286 0.212121212121212 35 1 21 1 71 104 353873 353907 Methanotorris igneus Kol 5, complete genome blastn 35 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanotorris Methanotorris igneus
4821203 4821203 PRJEB64798_P_NODE_208944_length_165_cov_1.586207_g207178_i0 PRJEB64798 208944 165 1.586207 2.61724155 Methanobrevibacter 2172 Archaea Archaea 287 3.47e-73   NTclustered gi|2791693311|gb|CP144200.1| 2173 g207178 i0 99.367 106.593939393939 158 1 96 0 6 163 1282463 1282620 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 17588 287 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
6095912 6095912 PRJEB64798_P_NODE_120885_length_206_cov_2.929936_g119119_i0 PRJEB64798 120885 206 2.929936 6.03566816 Methanobrevibacter 2172 Archaea Archaea 246 7.7e-61   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g119119 i0 86.977 31.8398058252427 215 12 98 3 1 201 84605 84393 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 6559 246 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
6505936 6505936 PRJEB64798_P_NODE_189366_length_170_cov_10.438017_g187600_i0 PRJEB64798 189366 170 10.438017 17.7446289 Methanobrevibacter arboriphilus 39441 Archaea Archaea 52.8 0.014   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g187600 i0 100 0.329411764705882 28 0 16 0 89 116 1631159 1631132 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 56 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
6506515 6506515 PRJEB64798_P_NODE_228506_length_159_cov_4.890909_g226740_i0 PRJEB64798 228506 159 4.890909 7.77654531 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 265 1.55e-66   NTclustered gi|2874253795|emb|OY969779.1| 176233 g226740 i0 98.026 96.5534591194968 152 3 96 0 3 154 157287 157438 MAG: uncultured Methanobacteriaceae archaeon isolate MFD04716.bin.c.1 genome assembly, chromosome: 1 blastn 15352 265 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
13746505 13746505 PRJEB64798_P_NODE_184411_length_172_cov_9.130081_g182645_i0 PRJEB64798 184411 172 9.130081 15.70373932 Methanobacteriaceae 2159 Archaea Archaea 52.8 0.014   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g182645 i0 96.875 0.744186046511628 32 0 18 1 79 109 939350 939319 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 128 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
16295961 16295961 PRJEB64798_P_NODE_23193_length_410_cov_34.789474_g21450_i0 PRJEB64798 23193 410 34.789474 142.6368434 Methanobacteriota 28890 Archaea Archaea 71.3 1.09e-7   NTclustered gi|507148390|ref|NR_103193.1| 2180 g21450 i0 93.617 0.968292682926829 47 3 11 0 284 330 1176 1222 Methanothermus fervidus strain DSM 2088 23S ribosomal RNA gene, complete sequence blastn 397 71.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanothermaceae Methanothermus Methanothermus fervidus
16296114 16296114 PRJEB64798_P_NODE_30413_length_357_cov_4.055195_g28656_i0 PRJEB64798 30413 357 4.055195 14.47704615 root 1 Root_unresolved Root_unresolved 623 5.709999999999999e-174   NTclustered gi|2230636480|gb|ON341022.1| 2164 g28656 i0 98.584 104.655462184874 353 4 99 1 1 352 1269 917 Methanobacterium sp. strain ERen54 16S ribosomal RNA gene, partial sequence blastn 37362 628 0.99203821656051006 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
17981396 17981396 PRJEB64798_P_NODE_94795_length_212_cov_4.398773_g93029_i0 PRJEB64798 94795 212 4.398773 9.32539876 Methanocaldococcus jannaschii 2190 Archaea Archaea 52.8 0.019   NTclustered gi|6626255|gb|L77117.1| 243232 g93029 i0 96.875 0.150943396226415 32 0 15 1 60 91 983255 983285 Methanocaldococcus jannaschii DSM 2661, complete genome blastn 32 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus jannaschii
19253516 19253516 PRJEB64798_P_NODE_20716_length_437_cov_11.997423_g18984_i0 PRJEB64798 20716 437 11.997423 52.42873851 Methanococcus maripaludis 39152 Archaea Archaea 171 1.12e-37   NTclustered gi|693012515|dbj|AP011526.1| 637914 g18984 i0 80 19.162471395881 235 44 53 3 194 425 34990 35224 Methanococcus maripaludis KA1 DNA, complete genome blastn 8374 171 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
21803099 21803099 PRJEB64798_P_NODE_103838_length_212_cov_2.404908_g102072_i0 PRJEB64798 103838 212 2.404908 5.09840496 Methanobrevibacter millerae 230361 Archaea Archaea 278 2.82e-70   NTclustered gi|968564921|gb|CP011266.1| 230361 g102072 i0 88.991 136.63679245283 218 13 98 6 1 207 542249 542032 Methanobrevibacter millerae strain SM9, complete genome blastn 28967 278 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
23080875 23080875 PRJEB64798_P_NODE_42279_length_303_cov_5.377953_g40514_i0 PRJEB64798 42279 303 5.377953 16.29519759 Methanobrevibacter arboriphilus 39441 Archaea Archaea 54.7 0.008   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g40514 i0 96.875 0.105610561056106 32 1 11 0 16 47 134947 134916 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 32 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
24353978 24353978 PRJEB64798_P_NODE_219300_length_162_cov_4.168142_g217534_i0 PRJEB64798 219300 162 4.168142 6.75239004 Methanocaldococcus lauensis 2546128 Archaea Archaea 54.7 0.004   NTclustered gi|2045108028|emb|LR792634.1| 2546128 g217534 i0 100 0.358024691358025 29 0 18 0 52 80 915858 915886 Methanocaldococcus sp. SG1 genome assembly, chromosome: I blastn 58 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus lauensis
27444801 27444801 PRJEB64798_P_NODE_137483_length_194_cov_19.772414_g135717_i0 PRJEB64798 137483 194 19.772414 38.35848316 Methanobacterium paludis 868131 Archaea Archaea 66.2 9.91e-11   NR WP_013826057.1 868131 g135717 i0 52.8 4.48453608247423 72 23 94.3 1 8 190 473 544 WP_013826057.1 histidine kinase dimerization/phosphoacceptor domain -containing protein [Methanobacterium paludis] diamond 870 66.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium paludis
28770772 28770772 PRJEB64798_P_NODE_77927_length_218_cov_2.840237_g76161_i0 PRJEB64798 77927 218 2.840237 6.19171666 Methanocaldococcus lauensis 2546128 Archaea Archaea 78.2 1.76e-15   NR CAB3287519.1 2546128 g76161 i0 53.9 1.04587155963303 76 31 99.1 1 2 217 111 186 CAB3287519.1 protein of unknown function [Methanocaldococcus lauensis] diamond 228 78.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus lauensis
30539327 30539327 PRJEB64798_P_NODE_247853_length_152_cov_8.533981_g246087_i0 PRJEB64798 247853 152 8.533981 12.97165112 Methanocaldococcus bathoardescens 1301915 Archaea Archaea 43.5 0.00569   NR AIJ06030.1 1301915 g246087 i0 59.5 0.730263157894737 37 15 73 0 117 7 183 219 AIJ06030.1 hypothetical protein JH146_1188 [Methanocaldococcus bathoardescens] diamond 111 43.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus bathoardescens
30753616 30753616 PRJEB64798_P_NODE_75934_length_221_cov_4.343023_g74168_i0 PRJEB64798 75934 221 4.343023 9.59808083 Methanobrevibacter 2172 Archaea Archaea 120 8.96e-30   NR WP_295614768.1 253161 g74168 i0 77.5 1.92760180995475 71 16 96.4 0 213 1 683 753 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 426 120 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30943233 30943233 PRJEB64798_P_NODE_118374_length_207_cov_5.645570_g116608_i0 PRJEB64798 118374 207 5.64557 11.6863299 root 1 Root_unresolved Root_unresolved 58.2 3.24e-8   NR MDR3063139.1 66852 g116608 i0 55 16.3623188405797 40 18 58 0 120 1 128 167 MDR3063139.1 AAA family ATPase [Methanobrevibacter sp.] diamond 3387 58.5 0.994871794871795 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31045048 31045048 PRJEB64798_P_NODE_101815_length_212_cov_2.754601_g100049_i0 PRJEB64798 101815 212 2.754601 5.83975412 uncultured Methanobacterium sp. 176306 Archaea Archaea 54.7 1.54e-6   NR WP_321423208.1 176306 g100049 i0 57.1 1.48584905660377 49 17 63.7 2 142 8 291 339 WP_321423208.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [uncultured Methanobacterium sp.] diamond 315 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium uncultured Methanobacterium sp.
31132373 31132373 PRJEB64798_P_NODE_141555_length_192_cov_13.769231_g139789_i0 PRJEB64798 141555 192 13.769231 26.43692352 root 1 Root_unresolved Root_unresolved 46.6 8.17e-4   NR MBO7695778.1 66852 g139789 i0 57.1 1.140625 35 15 54.7 0 110 6 94 128 MBO7695778.1 anaerobic ribonucleoside-triphosphate reductase [Methanobrevibacter sp.] diamond 219 47 0.991489361702128 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32341829 32341829 PRJEB64798_P_NODE_185779_length_172_cov_2.552846_g184013_i0 PRJEB64798 185779 172 2.552846 4.39089512 Methanobacteriaceae archaeon 2099680 Archaea Archaea 79.3 4.58e-18   NR MBX7076480.1 2099680 g184013 i0 82.9 0.715116279069767 41 7 71.5 0 168 46 12 52 MBX7076480.1 NADH-quinone oxidoreductase subunit A [Methanobacteriaceae archaeon] diamond 123 79.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;