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contig_metadata

5 rows where bioproject = "PRJEB64798", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 5 ✖

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJEB64798 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1403397 1403397 PRJEB64798_P_NODE_38262_length_319_cov_10.370370_g36502_i0 PRJEB64798 38262 319 10.37037 33.0814803 Trichonympha turkestanica 3135423 Parabasalia other_Eukaryota 73.1 2.3e-8   NTclustered gi|2705618581|gb|PP554857.1| 3135423 g36502 i0 86.567 2.03134796238245 67 7 21 2 209 274 2504 2439 Trichonympha turkestanica voucher ANA-2 internal transcribed spacer region, partial sequence blastn 648 73.1 1 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha turkestanica
15021718 15021718 PRJEB64798_P_NODE_93292_length_212_cov_4.975460_g91526_i0 PRJEB64798 93292 212 4.97546 10.5479752 Tritrichomonas 5723 Parabasalia other_Eukaryota 187 4.9e-43   NTclustered gi|2303321782|gb|OP437559.1| 5726 g91526 i0 100 73.9622641509434 101 0 48 0 1 101 140 40 Tritrichomonas muris isolate CCG-6 gerbil small subunit ribosomal RNA gene, partial sequence blastn 15680 187 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas muris
19253225 19253225 PRJEB64798_P_NODE_186916_length_171_cov_9.270492_g185150_i0 PRJEB64798 186916 171 9.270492 15.85254132 Trichomonas gallinae 56777 Parabasalia other_Eukaryota 110 8.38e-20   NTclustered gi|2587729135|gb|OR478973.1| 56777 g185150 i0 80.851 28.187134502924 141 25 82 2 32 171 387 526 Trichomonas gallinae beta-actin (ACTB) mRNA, complete cds blastn 4820 110 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas gallinae
23079506 23079506 PRJEB64798_P_NODE_178019_length_175_cov_3.738095_g176253_i0 PRJEB64798 178019 175 3.738095 6.54166625 Tritrichomonas augusta 5725 Parabasalia other_Eukaryota 174 3.02e-39   NTclustered gi|2274983416|gb|OP038912.1| 5725 g176253 i0 84.746 1.01142857142857 177 24 100 3 1 175 2551 2726 Tritrichomonas augusta isolate T1 large subunit ribosomal RNA gene, partial sequence blastn 177 174 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas augusta
29268796 29268796 PRJEB64798_P_NODE_239449_length_155_cov_5.452830_g237683_i0 PRJEB64798 239449 155 5.45283 8.4518865 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.4 9.62e-17   NR XP_067775829.1 135588 g237683 i0 80 2.61290322580645 45 9 87.1 0 155 21 346 390 XP_067775829.1 ATP-dependent RNA helicase SUB2 [Histomonas meleagridis] diamond 405 82.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;