RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB64798" and tax_clade = "Luna-2 subcluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-2 subcluster · 3 ✖

bioproject 1

  • PRJEB64798 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13746241 13746241 PRJEB64798_P_NODE_13291_length_547_cov_5811.212851_g11647_i0 PRJEB64798 13291 547 5811.212851 31787.33429497 Aurantimicrobium 1705353 Bacteria Bacteria 828 0   NTclustered gi|45260656|emb|AJ507464.2| 207604 g11647 i0 94.757 68.2851919561243 534 25 97 3 1 532 544 12 Actinobacterium MWH-Wo1 16S rRNA gene, ITS1, and partial 23S rRNA gene, strain MWH-Wo1 blastn 37352 835 0.991616766467066 Bacteria Luna-2 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   actinobacterium MWH-Wo1
16295568 16295568 PRJEB64798_P_NODE_15373_length_508_cov_3790.943355_g13686_i0 PRJEB64798 15373 508 3790.943355 19257.9922434 Aurantimicrobium 1705353 Bacteria Bacteria 710 0   NTclustered gi|45260656|emb|AJ507464.2| 207604 g13686 i0 92.57 66.505905511811 498 31 97 5 16 508 12 508 Actinobacterium MWH-Wo1 16S rRNA gene, ITS1, and partial 23S rRNA gene, strain MWH-Wo1 blastn 33785 717 0.99023709902371 Bacteria Luna-2 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   actinobacterium MWH-Wo1
20119344 20119344 PRJEB64798_P_NODE_13296_length_547_cov_3130.510040_g11652_i0 PRJEB64798 13296 547 3130.51004 17123.8899188 Aurantimicrobium 1705353 Bacteria Bacteria 822 0   NTclustered gi|45260656|emb|AJ507464.2| 207604 g11652 i0 94.569 68.2778793418647 534 26 97 3 1 532 544 12 Actinobacterium MWH-Wo1 16S rRNA gene, ITS1, and partial 23S rRNA gene, strain MWH-Wo1 blastn 37348 830 0.990361445783133 Bacteria Luna-2 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae   actinobacterium MWH-Wo1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;