RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB64798", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Harrisoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Harrisoniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJEB64798 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31013156 31013156 PRJEB64798_P_NODE_166355_length_180_cov_6.068702_g164589_i0 PRJEB64798 166355 180 6.068702 10.9236636 Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_ 2528272 Bacteria Bacteria 68.6 1.1e-13   NR OGY66919.1 1798408 g164589 i0 71.8 0.65 39 11 65 0 122 6 18 56 OGY66919.1 MAG: hypothetical protein A3I89_00795 [Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_41_11] diamond 117 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_41_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;