RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB6097" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB6097 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1400055 1400055 PRJEB6097_S_NODE_2542_length_282_cov_14.599190_g2488_i0 PRJEB6097 2542 282 14.59919 41.1697158 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 520 5.93e-143   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2488 i0 100 99.8971631205674 281 0 99 0 2 282 328 48 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 28171 520 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6095436 6095436 PRJEB6097_S_NODE_6245_length_165_cov_3.800000_g6191_i0 PRJEB6097 6245 165 3.8 6.27 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 305 9.59e-79   NTclustered gi|1695780|gb|U42448.1|CAU42448 45110 g6191 i0 100 100.315151515152 165 0 100 0 1 165 379 215 Cercomonas ATCC50316 18S ribosomal RNA gene, complete sequence blastn 16552 305 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50316
12879228 12879228 PRJEB6097_S_NODE_6631_length_154_cov_2.075630_g6577_i0 PRJEB6097 6631 154 2.07563 3.1964702 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 169 1.2e-37   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g6577 i0 95.283 44.7272727272727 106 5 69 0 3 108 3751 3856 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 6888 169 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
28391685 28391685 PRJEB6097_S_NODE_6806_length_150_cov_1.513043_g6752_i0 PRJEB6097 6806 150 1.513043 2.2695645 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 82 2.85e-19   NR MES1911722.1 1215613 g6752 i0 75 0.96 48 12 96 0 146 3 1 48 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 144 82 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;