RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB6097" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6097 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3542811 3542811 PRJEB6097_S_NODE_6083_length_170_cov_9.466667_g6029_i0 PRJEB6097 6083 170 9.466667 16.0933339 Agaricomycetes 155619 Fungi Fungi 99 1.8e-16   NTclustered gi|565619620|gb|KC603718.1| 91677 g6029 i0 88.889 11.7647058823529 81 8 47 1 91 170 100 20 Hebeloma radicosum voucher TNS Kasuya B791 large subunit ribosomal RNA gene, partial sequence blastn 2000 99 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hymenogastraceae Hebeloma Hebeloma radicosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;