RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB6097" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6097 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1400067 1400067 PRJEB6097_S_NODE_5422_length_211_cov_2.840909_g5368_i0 PRJEB6097 5422 211 2.840909 5.99431799 Spelobia clunipes 1888022 Arthropoda Arthropoda 315 2.1399999999999993e-81   NTclustered gi|1880643096|gb|MT584135.1| 1888022 g5368 i0 96.335 93.3981042654028 191 7 91 0 21 211 6401 6591 Spelobia clunipes isolate DM962 mitochondrion blastn 19707 315 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Sphaeroceridae Spelobia Spelobia clunipes
6095434 6095434 PRJEB6097_S_NODE_5765_length_186_cov_2.450331_g5711_i0 PRJEB6097 5765 186 2.450331 4.55761566 Bombus 28641 Arthropoda Arthropoda 52.8 0.016   NTclustered gi|2832700248|ref|XR_011174825.1| 103934 g5711 i0 100 0.301075268817204 28 0 15 0 99 126 1433 1460 PREDICTED: Bombus flavifrons uncharacterized lncRNA (LOC138186175), ncRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Bombus Bombus flavifrons
10328635 10328635 PRJEB6097_S_NODE_6009_length_173_cov_2.623188_g5955_i0 PRJEB6097 6009 173 2.623188 4.53811524 Chironomus tepperi 113505 Arthropoda Arthropoda 111 2.36e-20   NTclustered gi|2874216783|ref|XM_070642639.1| 113505 g5955 i0 89.011 15.4913294797688 91 8 52 2 84 173 1462 1373 PREDICTED: Chironomus tepperi elongation factor 1-alpha-like (LOC139092294), mRNA blastn 2680 111 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Chironomus Chironomus tepperi
16294945 16294945 PRJEB6097_S_NODE_6593_length_155_cov_1.591667_g6539_i0 PRJEB6097 6593 155 1.591667 2.46708385 root 1 Root_unresolved Root_unresolved 281 1.49e-71   NTclustered gi|78097480|gb|AC167666.4| 7176 g6539 i0 99.355 287 155 1 100 0 1 155 1013 1167 Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940120D9, complete sequence blastn 44485 281 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Culex Culex quinquefasciatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;