RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJEB6097" and tax_kingdom = "Fungi"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 13 ✖

tax_clade 1

bioproject 1

  • PRJEB6097 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3542811 3542811 PRJEB6097_S_NODE_6083_length_170_cov_9.466667_g6029_i0 PRJEB6097 6083 170 9.466667 16.0933339 Agaricomycetes 155619 Fungi Fungi 99 1.8e-16   NTclustered gi|565619620|gb|KC603718.1| 91677 g6029 i0 88.889 11.7647058823529 81 8 47 1 91 170 100 20 Hebeloma radicosum voucher TNS Kasuya B791 large subunit ribosomal RNA gene, partial sequence blastn 2000 99 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hymenogastraceae Hebeloma Hebeloma radicosum
7778083 7778083 PRJEB6097_S_NODE_6087_length_170_cov_5.748148_g6033_i0 PRJEB6097 6087 170 5.748148 9.7718516 uncultured fungus 175245 Fungi Fungi 252 1.31e-62   NTclustered gi|400178660|gb|JX241713.1| 175245 g6033 i0 93.491 6.22941176470588 169 11 99 0 1 169 269 101 Uncultured fungus clone CheiFrLf2291 26S ribosomal RNA gene, partial sequence blastn 1059 252 1 Eukaryota Opisthokonta Fungi           uncultured fungus
7778086 7778086 PRJEB6097_S_NODE_6287_length_164_cov_1.689922_g6233_i0 PRJEB6097 6287 164 1.689922 2.77147208 Ophiostoma torulosum 96403 Fungi Fungi 303 3.42e-78   NTclustered gi|325513885|gb|HQ343317.1| 96403 g6233 i0 100 96.640243902439 164 0 100 0 1 164 3275 3112 Ophiostoma torulosum strain CBS 730.71 small subunit ribosomal RNA gene, complete sequence; and reverse transcriptase and double motif LAGLIDADG homing endonuclease genes, complete cds; mitochondrial blastn 15849 303 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Ophiostomatales Ophiostomataceae Ophiostoma Ophiostoma torulosum
9920474 9920474 PRJEB6097_S_NODE_5848_length_181_cov_4.993151_g5794_i0 PRJEB6097 5848 181 4.993151 9.03760331 Saccharomyces 4930 Fungi Fungi 292 8.32e-75   NTclustered gi|2161760974|gb|OL763550.1| 4932 g5794 i0 99.379 88.9005524861878 161 1 89 0 1 161 277 117 Saccharomyces cerevisiae clone S5-19 large subunit ribosomal RNA gene, partial sequence blastn 16091 292 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
12471248 12471248 PRJEB6097_S_NODE_110_length_573_cov_21970.540892_g56_i0 PRJEB6097 110 573 21970.540892 125891.19931116 Eukaryota 2759 Fungi Fungi 636 1.2299999999999998e-177   NTclustered gi|514829572|gb|KC771883.1| 4929 g56 i0 100 56.1099476439791 344 0 60 0 230 573 368 25 Meyerozyma guilliermondii strain SNP3S 26S ribosomal RNA gene, partial sequence blastn 32151 636 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
12879215 12879215 PRJEB6097_S_NODE_2831_length_275_cov_31.000000_g2777_i0 PRJEB6097 2831 275 31 85.25 uncultured fungus 175245 Fungi Fungi 448 2.7599999999999995e-121   NTclustered gi|2159201441|emb|OU940475.1| 175245 g2777 i0 96 95.4872727272727 275 11 100 0 1 275 722 996 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus01768 blastn 26259 448 1 Eukaryota Opisthokonta Fungi           uncultured fungus
16294941 16294941 PRJEB6097_S_NODE_1333_length_338_cov_38955.623762_g1279_i0 PRJEB6097 1333 338 38955.623762 131670.00831556 Eukaryota 2759 Fungi Fungi 167 1.09e-36   NTclustered gi|658131895|emb|HF968949.1| 4874 g1279 i0 96.078 45.1420118343195 102 4 30 0 237 338 1619 1518 Gigaspora margarita partial 28S rRNA gene, strain BEG152, isolate spore 2, clone FL2_12_91 blastn 15258 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
16294944 16294944 PRJEB6097_S_NODE_513_length_432_cov_29761.506297_g459_i0 PRJEB6097 513 432 29761.506297 128569.70720304 Opisthokonta 33154 Fungi Fungi 374 7.829999999999997e-99   NTclustered gi|66805490|gb|DQ008146.1| 29917 g459 i0 99.512 47.4537037037037 205 1 47 0 1 205 193 397 Cladosporium cladosporioides strain CBS 109501 28S large subunit ribosomal RNA gene, partial sequence blastn 20500 374 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
16702254 16702254 PRJEB6097_S_NODE_2914_length_271_cov_22.855932_g2860_i0 PRJEB6097 2914 271 22.855932 61.93957572 uncultured fungus 175245 Fungi Fungi 315 2.87e-81   NTclustered gi|583831600|gb|KF565163.1| 175245 g2860 i0 87.591 89.7675276752768 274 30 100 4 1 271 312 40 Uncultured soil fungus clone NCD_LSU_otu193 28S ribosomal RNA gene, partial sequence blastn 24327 315 1 Eukaryota Opisthokonta Fungi           uncultured fungus
20526523 20526523 PRJEB6097_S_NODE_5277_length_227_cov_4.234375_g5223_i0 PRJEB6097 5277 227 4.234375 9.61203125 Meyerozyma guilliermondii 4929 Fungi Fungi 217 6.78e-52   NTclustered gi|146421244|ref|XM_001486523.1| 294746 g5223 i0 90.741 115.638766519824 162 15 71 0 1 162 1207 1368 Meyerozyma guilliermondii ATCC 6260 ubiquitin (PGUG_02244), partial mRNA blastn 26250 217 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
20526533 20526533 PRJEB6097_S_NODE_97_length_599_cov_20504.757092_g44_i0 PRJEB6097 97 599 20504.757092 122823.49498108 uncultured fungus 175245 Fungi Fungi 394 8.55e-105   NTclustered gi|2159202025|emb|OU940232.1| 175245 g44 i0 91.409 44.8597662771285 291 20 48 5 1 287 165 454 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus01527 blastn 26871 394 1 Eukaryota Opisthokonta Fungi           uncultured fungus
23944600 23944600 PRJEB6097_S_NODE_119_length_564_cov_21758.034026_g65_i0 PRJEB6097 119 564 21758.034026 122715.31190664 Eukaryota 2759 Fungi Fungi 617 4.37e-172   NTclustered gi|514829572|gb|KC771883.1| 4929 g65 i0 100 54.6879432624113 334 0 59 0 1 334 25 358 Meyerozyma guilliermondii strain SNP3S 26S ribosomal RNA gene, partial sequence blastn 30844 617 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
27476026 27476026 PRJEB6097_S_NODE_3823_length_256_cov_1.945701_g3769_i0 PRJEB6097 3823 256 1.945701 4.98099456 Jimgerdemannia flammicorona 994334 Fungi Fungi 46.2 7.6e-4   NR RUS34214.1 994334 g3769 i0 38.8 0.57421875 49 30 57.4 0 21 167 67 115 RUS34214.1 hypothetical protein BC938DRAFT_481852 [Jimgerdemannia flammicorona] diamond 147 46.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Endogonomycetes Endogonales Endogonaceae Jimgerdemannia Jimgerdemannia flammicorona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;