RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6097", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJEB6097 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2675649 2675649 PRJEB6097_S_NODE_1563_length_324_cov_34.726644_g1509_i0 PRJEB6097 1563 324 34.726644 112.51432656 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 422 2.01e-113   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g1509 i0 90.06 144.87962962963 332 24 100 7 1 324 4805 4475 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 46941 422 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
7778070 7778070 PRJEB6097_S_NODE_427_length_452_cov_28289.896882_g373_i0 PRJEB6097 427 452 28289.896882 127870.33390664 Neobodo designis 312471 Euglenozoa other_Eukaryota 387 1.06e-102   NTclustered gi|197723537|gb|EF681922.2| 312471 g373 i0 94.444 88.4800884955752 252 13 56 1 201 452 1224 974 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 39993 387 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;