RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB6097" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB6097 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27634025 27634025 PRJEB6097_S_NODE_6324_length_163_cov_1.867188_g6270_i0 PRJEB6097 6324 163 1.867188 3.04351644 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 46.6 5.54e-4   NR MDD4151767.1 2044595 g6270 i0 45.8 0.883435582822086 48 26 88.3 0 159 16 195 242 MDD4151767.1 glucosaminidase domain-containing protein [Candidatus Altimarinota bacterium] diamond 144 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30223145 30223145 PRJEB6097_S_NODE_6232_length_166_cov_1.221374_g6178_i0 PRJEB6097 6232 166 1.221374 2.02748084 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 67 3.62e-11   NR MDD2744996.1 2044595 g6178 i0 63.6 0.993975903614458 55 20 99.4 0 166 2 229 283 MDD2744996.1 protein translocase subunit SecD [Candidatus Altimarinota bacterium] diamond 165 67 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30381583 30381583 PRJEB6097_S_NODE_5753_length_187_cov_2.098684_g5699_i0 PRJEB6097 5753 187 2.098684 3.92453908 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 82.8 1.31e-16   NR MFA6091046.1 2044595 g5699 i0 65 1.92513368983957 60 21 96.3 0 3 182 604 663 MFA6091046.1 efflux RND transporter permease subunit [Candidatus Altimarinota bacterium] diamond 360 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;