RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6055", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB6055 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1400008 1400008 PRJEB6055_S_NODE_1102_length_266_cov_9.774892_g1078_i0 PRJEB6055 1102 266 9.774892 26.00121272 Betacoronavirus pandemicum 3418604 Viruses Viruses 60.2 1.45e-4   NTclustered gi|2557657929|emb|OY694257.1| 2697049 g1078 i0 97.143 11.9511278195489 35 1 13 0 226 260 22475 22509 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3179 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20526502 20526502 PRJEB6055_S_NODE_937_length_280_cov_15193.269388_g913_i0 PRJEB6055 937 280 15193.269388 42541.1542864 Nilaparvata lugens C virus 1577072 Viruses Viruses 117 9.02e-22   NTclustered gi|726973360|gb|KM270560.1| 1577072 g913 i0 85.841 19.2035714285714 113 12 39 3 59 167 9160 9048 Nilaparvata lugens C virus, complete genome blastn 5377 117 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Nilaparvata lugens C virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;