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contig_metadata

10 rows where bioproject = "PRJEB6055" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6055 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1400011 1400011 PRJEB6055_S_NODE_1502_length_239_cov_7.156863_g1478_i0 PRJEB6055 1502 239 7.156863 17.10490257 Pucciniomycotina sp. 2011928 Fungi Fungi 409 1.11e-109   NTclustered gi|2648564344|gb|PP130148.1| 2011928 g1478 i0 97.49 100.196652719665 239 6 100 0 1 239 59 297 Pucciniomycotina sp. strain FB2-PD4 large subunit ribosomal RNA gene, partial sequence blastn 23947 409 1 Eukaryota Opisthokonta Fungi Basidiomycota         Pucciniomycotina sp.
2267491 2267491 PRJEB6055_S_NODE_1482_length_240_cov_17.204878_g1458_i0 PRJEB6055 1482 240 17.204878 41.2917072 Agaricomycetes 155619 Fungi Fungi 117 7.55e-22   NTclustered gi|2723225103|dbj|LC813565.1| 5353 g1458 i0 83.333 53.2083333333333 126 21 53 0 33 158 634 759 Lentinula edodes BCRC:MU30948 DNA, clone Type1 blastn 12770 117 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
7369760 7369760 PRJEB6055_S_NODE_4786_length_163_cov_2.414062_g4762_i0 PRJEB6055 4786 163 2.414062 3.93492106 Agaricomycetes 155619 Fungi Fungi 92.4 2.02e-22   NR VWO94102.1 34458 g4762 i0 80.9 4.10429447852761 47 9 86.5 0 2 142 67 113 VWO94102.1 2-cysteine peroxiredoxin, partial [Ganoderma boninense] diamond 669 92.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
10328582 10328582 PRJEB6055_S_NODE_3009_length_191_cov_2.730769_g2985_i0 PRJEB6055 3009 191 2.730769 5.21576879 Malassezia restricta 76775 Fungi Fungi 348 1.87e-91   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2985 i0 99.476 54.6544502617801 191 1 100 0 1 191 3170 3360 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 10439 348 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
12471244 12471244 PRJEB6055_S_NODE_5850_length_151_cov_1.974138_g5826_i0 PRJEB6055 5850 151 1.974138 2.98094838 Sporidiobolaceae 1799696 Fungi Fungi 274 2.42e-69   NTclustered gi|386776365|gb|JQ581047.1| 33191 g5826 i0 99.338 99.9867549668874 151 1 100 0 1 151 214 64 Rhodosporidium lusitaniae strain HAI-Y-58 26S ribosomal RNA gene, partial sequence blastn 15098 274 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodosporidiobolus Rhodosporidiobolus lusitaniae
17977129 17977129 PRJEB6055_S_NODE_3875_length_176_cov_1.588652_g3851_i0 PRJEB6055 3875 176 1.588652 2.79602752 Kondoa malvinella 36055 Fungi Fungi 313 6.1699999999999985e-81   NTclustered gi|6273180|gb|AF189903.1| 36055 g3851 i0 98.864 99.3920454545455 176 1 100 1 1 176 232 58 Kondoa malvinella culture CBS:6082 26S ribosomal RNA gene, partial sequence blastn 17493 313 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Kondoaceae Kondoa Kondoa malvinella
20526480 20526480 PRJEB6055_S_NODE_1877_length_223_cov_8.143617_g1853_i0 PRJEB6055 1877 223 8.143617 18.16026591 Moesziomyces rugulosus 84752 Fungi Fungi 407 3.67e-109   NTclustered gi|3901107|emb|AJ235300.1| 84752 g1853 i0 99.552 101.219730941704 223 1 100 0 1 223 275 53 Pseudozyma rugulosa (strain CBS 170.88) 26S rRNA gene, partial blastn 22572 407 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Moesziomyces Moesziomyces rugulosus
23077554 23077554 PRJEB6055_S_NODE_2219_length_211_cov_5.704545_g2195_i0 PRJEB6055 2219 211 5.704545 12.03658995 Marasmius sp. 5 GMB-2014 1588974 Fungi Fungi 363 7.539999999999999e-96   NTclustered gi|757958620|gb|KP013035.1| 1588974 g2195 i0 97.63 101.943127962085 211 5 100 0 1 211 914 704 Marasmius sp. 5 GMB-2014 voucher MEL:2382672 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21510 363 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Marasmiaceae Marasmius Marasmius sp. 5 GMB-2014
23077567 23077567 PRJEB6055_S_NODE_4359_length_169_cov_1.492537_g4335_i0 PRJEB6055 4359 169 1.492537 2.52238753 Ceraceosorus guamensis 1522189 Fungi Fungi 87.8 2.51e-19   NR XP_025368547.1 1522189 g4335 i0 75 0.994082840236686 56 14 99.4 0 2 169 166 221 XP_025368547.1 ribosomal protein S3Ae [Ceraceosorus guamensis] diamond 168 87.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Ceraceosorales Ceraceosoraceae Ceraceosorus Ceraceosorus guamensis
25218357 25218357 PRJEB6055_S_NODE_880_length_287_cov_16.674603_g856_i0 PRJEB6055 880 287 16.674603 47.85611061 Malassezia 55193 Fungi Fungi 531 2.799999999999999e-146   NTclustered gi|915512619|gb|KP825402.1| 76775 g856 i0 100 98.9686411149826 287 0 100 0 1 287 21 307 Malassezia restricta strain ISOSEB46F 28S ribosomal RNA gene, partial sequence blastn 28404 531 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;