contig_metadata
14 rows where bioproject = "PRJEB6055" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125530 | 125530 | PRJEB6055_S_NODE_1821_length_225_cov_3.115789_g1797_i0 | PRJEB6055 | 1821 | 225 | 3.115789 | 7.01052525 | Anaerococcus sp. Marseille-Q7828 | 3036300 | Bacteria | Bacteria | 335 | 1.7699999999999994e-87 | NTclustered | gi|2472116327|emb|OX458331.1| | 3036300 | g1797 | i0 | 94.86 | 49.3911111111111 | 214 | 11 | 95 | 0 | 1 | 214 | 436796 | 437009 | Anaerococcus sp. Marseille-Q7828 genome assembly, chromosome: contig00001 | blastn | 11113 | 335 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. Marseille-Q7828 | ||
| 2675627 | 2675627 | PRJEB6055_S_NODE_4783_length_163_cov_2.726562_g4759_i0 | PRJEB6055 | 4783 | 163 | 2.726562 | 4.44429606 | Lacticaseibacillus parahuelsenbergensis | 3068305 | Bacteria | Bacteria | 285 | 1.23e-72 | NTclustered | gi|2563953291|gb|CP132482.1| | 3068305 | g4759 | i0 | 98.16 | 460.030674846626 | 163 | 3 | 100 | 0 | 1 | 163 | 819933 | 820095 | Lacticaseibacillus parahuelsenbergensis strain NCIMB 15471 chromosome, complete genome | blastn | 74985 | 285 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus parahuelsenbergensis | ||
| 6503777 | 6503777 | PRJEB6055_S_NODE_1006_length_275_cov_6.037500_g982_i0 | PRJEB6055 | 1006 | 275 | 6.0375 | 16.603125 | Finegoldia magna | 1260 | Bacteria | Bacteria | 503 | 5.809999999999998e-138 | NTclustered | gi|2127667581|gb|CP085957.1| | 1260 | g982 | i0 | 99.636 | 46.2690909090909 | 275 | 1 | 100 | 0 | 1 | 275 | 427563 | 427837 | Finegoldia magna strain FDAARGOS_1556 chromosome, complete genome | blastn | 12724 | 503 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 8645373 | 8645373 | PRJEB6055_S_NODE_2407_length_206_cov_1.707602_g2383_i0 | PRJEB6055 | 2407 | 206 | 1.707602 | 3.51766012 | Blautia | 572511 | Bacteria | Bacteria | 370 | 4.38e-98 | NTclustered | gi|2884829887|gb|CP176622.1| | 1322 | g2383 | i0 | 99.029 | 453.742718446602 | 206 | 2 | 100 | 0 | 1 | 206 | 1306722 | 1306517 | Blautia hansenii strain SFAD90 chromosome, complete genome | blastn | 93471 | 370 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Blautia | Blautia hansenii | ||
| 8645374 | 8645374 | PRJEB6055_S_NODE_5507_length_155_cov_1.350000_g5483_i0 | PRJEB6055 | 5507 | 155 | 1.35 | 2.0925 | Lactobacillus | 1578 | Bacteria | Bacteria | 287 | 3.21e-73 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g5483 | i0 | 100 | 378.993548387097 | 155 | 0 | 100 | 0 | 1 | 155 | 89568 | 89414 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 58744 | 287 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 11195573 | 11195573 | PRJEB6055_S_NODE_2249_length_210_cov_5.080000_g2225_i0 | PRJEB6055 | 2249 | 210 | 5.08 | 10.668 | Leuconostoc | 1243 | Bacteria | Bacteria | 324 | 3.54e-84 | NTclustered | gi|1799531339|gb|CP028255.1| | 1245 | g2225 | i0 | 98.378 | 241.752380952381 | 185 | 2 | 88 | 1 | 17 | 201 | 65058 | 65241 | Leuconostoc mesenteroides strain SRCM102735 chromosome, complete genome | blastn | 50768 | 324 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 11195574 | 11195574 | PRJEB6055_S_NODE_2569_length_201_cov_1.765060_g2545_i0 | PRJEB6055 | 2569 | 201 | 1.76506 | 3.5477706 | Lacticaseibacillus | 2759736 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|1206084366|gb|CP017065.1| | 1582 | g2545 | i0 | 100 | 480 | 201 | 0 | 100 | 0 | 1 | 201 | 779536 | 779736 | Lacticaseibacillus casei strain LC5 chromosome, complete genome | blastn | 96480 | 372 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus casei | ||
| 15020101 | 15020101 | PRJEB6055_S_NODE_1252_length_254_cov_42.863014_g1228_i0 | PRJEB6055 | 1252 | 254 | 42.863014 | 108.87205556 | Leuconostoc | 1243 | Bacteria | Bacteria | 470 | 5.37e-128 | NTclustered | gi|2410894178|gb|CP113947.1| | 33968 | g1228 | i0 | 100 | 347.405511811024 | 254 | 0 | 100 | 0 | 1 | 254 | 20827 | 20574 | Leuconostoc pseudomesenteroides strain L64 chromosome, complete genome | blastn | 88241 | 470 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc pseudomesenteroides | ||
| 17570112 | 17570112 | PRJEB6055_S_NODE_514_length_334_cov_8.371237_g490_i0 | PRJEB6055 | 514 | 334 | 8.371237 | 27.95993158 | Staphylococcus | 1279 | Bacteria | Bacteria | 527 | 4.289999999999999e-145 | NTclustered | gi|2105689500|gb|CP066719.1| | 1288 | g490 | i0 | 98.02 | 436.763473053892 | 303 | 6 | 91 | 0 | 32 | 334 | 875594 | 875896 | Staphylococcus xylosus strain TMW 2.1602 chromosome, complete genome | blastn | 145879 | 527 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus xylosus | ||
| 20526494 | 20526494 | PRJEB6055_S_NODE_5217_length_158_cov_1.430894_g5193_i0 | PRJEB6055 | 5217 | 158 | 1.430894 | 2.26081252 | Parvimonas micra | 33033 | Bacteria | Bacteria | 250 | 4.31e-62 | NTclustered | gi|2418005075|gb|CP101411.1| | 33033 | g5193 | i0 | 98.592 | 87.9367088607595 | 142 | 1 | 89 | 1 | 1 | 141 | 1107903 | 1107762 | Parvimonas micra strain PM89KC-AC-1 chromosome, complete genome | blastn | 13894 | 250 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Parvimonas | Parvimonas micra | ||
| 21394345 | 21394345 | PRJEB6055_S_NODE_277_length_398_cov_15.366391_g253_i0 | PRJEB6055 | 277 | 398 | 15.366391 | 61.15823618 | Streptococcus | 1301 | Bacteria | Bacteria | 645 | 1.3699999999999993e-180 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g253 | i0 | 100 | 299.942211055276 | 349 | 0 | 88 | 0 | 19 | 367 | 1571256 | 1571604 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 119377 | 645 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 23944595 | 23944595 | PRJEB6055_S_NODE_279_length_398_cov_6.666667_g255_i0 | PRJEB6055 | 279 | 398 | 6.666667 | 26.53333466 | Streptococcus | 1301 | Bacteria | Bacteria | 617 | 3e-172 | NTclustered | gi|470489451|ref|NR_076930.1| | 1318 | g255 | i0 | 98.567 | 294.479899497487 | 349 | 5 | 88 | 0 | 32 | 380 | 3 | 351 | Streptococcus parasanguinis strain FW213 23S ribosomal RNA gene, complete sequence | blastn | 117203 | 617 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus parasanguinis | ||
| 25218346 | 25218346 | PRJEB6055_S_NODE_140_length_476_cov_4.648526_g118_i0 | PRJEB6055 | 140 | 476 | 4.648526 | 22.12698376 | Leuconostoc | 1243 | Bacteria | Bacteria | 575 | 2.2199999999999992e-159 | NTclustered | gi|1799531339|gb|CP028255.1| | 1245 | g118 | i0 | 96.045 | 255.827731092437 | 354 | 13 | 74 | 1 | 1 | 353 | 67839 | 68192 | Leuconostoc mesenteroides strain SRCM102735 chromosome, complete genome | blastn | 121774 | 575 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 25218355 | 25218355 | PRJEB6055_S_NODE_620_length_318_cov_2.893993_g596_i0 | PRJEB6055 | 620 | 318 | 2.893993 | 9.20289774 | Streptococcus | 1301 | Bacteria | Bacteria | 560 | 3.999999999999998e-155 | NTclustered | gi|2246565702|gb|CP097843.1| | 1303 | g596 | i0 | 98.428 | 385.245283018868 | 318 | 5 | 100 | 0 | 1 | 318 | 17969 | 17652 | Streptococcus oralis strain HP01 chromosome, complete genome | blastn | 122508 | 560 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;