RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJEB6055" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6055 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
992288 992288 PRJEB6055_S_NODE_921_length_282_cov_544.882591_g897_i0 PRJEB6055 921 282 544.882591 1536.56890662 root 1 Root_unresolved Root_unresolved 518 2.13e-142   NTclustered gi|193072614|dbj|AB293446.1| 4932 g897 i0 100 122.067375886525 280 0 99 0 3 282 43368 43647 Saccharomyces cerevisiae gene for aquaporin Aqy1, complete cds, clone: COS5 blastn 34423 521 0.994241842610365 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
3542799 3542799 PRJEB6055_S_NODE_203_length_434_cov_8832.155388_g181_i0 PRJEB6055 203 434 8832.155388 38331.55438392 Ascomycota 4890 Fungi Fungi 475 2.0999999999999998e-129   NTclustered gi|1102645094|gb|KY108664.1| 27289 g181 i0 90.385 81.815668202765 364 32 83 3 70 431 492 130 Naumovozyma dairenensis culture CBS:421 large subunit ribosomal RNA gene, partial sequence blastn 35508 475 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Naumovozyma Naumovozyma dairenensis
4820220 4820220 PRJEB6055_S_NODE_2084_length_216_cov_3.464088_g2060_i0 PRJEB6055 2084 216 3.464088 7.48243008 root 1 Root_unresolved Root_unresolved 388 1.28e-103   NTclustered gi|2765120|emb|Y11713.1| 61459 g2060 i0 99.074 100 216 2 100 0 1 216 774 989 C.apollinis 18S rRNA gene blastn 21600 388 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes     Coniosporium Coniosporium apollinis
5228093 5228093 PRJEB6055_S_NODE_265_length_402_cov_10006.141689_g241_i0 PRJEB6055 265 402 10006.141689 40224.68958978 Fungi 4751 Fungi Fungi 126 7.049999999999999e-35   NR XP_054124123.1 37727 g241 i0 66.7 8.19402985074627 93 30 69.4 1 388 110 1 92 XP_054124123.1 uncharacterized protein EYB26_008897 [Talaromyces marneffei] diamond 3294 126 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Talaromyces Talaromyces marneffei
6095426 6095426 PRJEB6055_S_NODE_825_length_293_cov_353.941860_g801_i0 PRJEB6055 825 293 353.94186 1037.0496498 root 1 Root_unresolved Root_unresolved 440 4.959999999999998e-119   NTclustered gi|193072614|dbj|AB293446.1| 4932 g801 i0 100 96.8225255972696 238 0 81 0 56 293 43647 43410 Saccharomyces cerevisiae gene for aquaporin Aqy1, complete cds, clone: COS5 blastn 28369 440 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
6503781 6503781 PRJEB6055_S_NODE_1306_length_251_cov_4.333333_g1282_i0 PRJEB6055 1306 251 4.333333 10.87666583 Eremothecium sinecaudum 45286 Fungi Fungi 204 5.93e-48   NTclustered gi|1063853000|ref|XM_018131964.1| 45286 g1282 i0 85.075 30.593625498008 201 28 80 2 2 201 203 402 Eremothecium sinecaudum 60S ribosomal protein uL14 (AW171_hschr42355), partial mRNA blastn 7679 204 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Eremothecium Eremothecium sinecaudum
9920471 9920471 PRJEB6055_S_NODE_5008_length_160_cov_4.664000_g4984_i0 PRJEB6055 5008 160 4.664 7.4624 root 1 Root_unresolved Root_unresolved 291 2.5799999999999998e-74   NTclustered gi|1280049812|gb|MF072571.1| 29917 g4984 i0 99.375 99.9875 160 1 100 0 1 160 730 889 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 15998 292 0.996575342465753 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
12471247 12471247 PRJEB6055_S_NODE_930_length_281_cov_404.199187_g906_i0 PRJEB6055 930 281 404.199187 1135.79971547 root 1 Root_unresolved Root_unresolved 460 3.629999999999999e-125   NTclustered gi|193072614|dbj|AB293446.1| 4932 g906 i0 100 119.370106761566 249 0 100 0 33 281 43658 43410 Saccharomyces cerevisiae gene for aquaporin Aqy1, complete cds, clone: COS5 blastn 33543 460 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
13745716 13745716 PRJEB6055_S_NODE_71_length_591_cov_6.733813_g53_i0 PRJEB6055 71 591 6.733813 39.79683483 Ophiostomataceae 5152 Fungi Fungi 649 0   NTclustered gi|397559781|gb|JX028570.1| 61273 g53 i0 95.99 75.9255499153976 399 16 87 0 162 560 589 987 Ophiostoma piceae strain 28RJ 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 44872 654 0.992354740061162 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Ophiostomatales Ophiostomataceae Ophiostoma Ophiostoma piceae
17570111 17570111 PRJEB6055_S_NODE_5034_length_160_cov_1.832000_g5010_i0 PRJEB6055 5034 160 1.832 2.9312 root 1 Root_unresolved Root_unresolved 52.8 0.013   NTclustered gi|1102241290|ref|XM_019182078.1| 683960 g5010 i0 100 0.35 28 0 18 0 132 159 612 585 Wickerhamomyces anomalus NRRL Y-366-8 telomerase inhibitor (WICANDRAFT_33501), partial mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces anomalus
17977126 17977126 PRJEB6055_S_NODE_3495_length_182_cov_1.632653_g3471_i0 PRJEB6055 3495 182 1.632653 2.97142846 Verticillium alfalfae 1051613 Fungi Fungi 80.5 7.1e-11   NTclustered gi|302411699|ref|XM_003003637.1| 526221 g3471 i0 80.508 9.56043956043956 118 12 59 5 41 148 232 116 Verticillium alfalfae VaMs.102 60S acidic ribosomal protein P2 partial mRNA blastn 1740 80.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Plectosphaerellaceae Verticillium Verticillium alfalfae
20118790 20118790 PRJEB6055_S_NODE_1976_length_219_cov_19963.304348_g1952_i0 PRJEB6055 1976 219 19963.304348 43719.63652212 root 1 Root_unresolved Root_unresolved 283 6.31e-72   NTclustered gi|1280049812|gb|MF072571.1| 29917 g1952 i0 100 69.8675799086758 153 0 70 0 67 219 704 552 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 15301 285 0.992982456140351 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
22669177 22669177 PRJEB6055_S_NODE_538_length_330_cov_15.867797_g514_i0 PRJEB6055 538 330 15.867797 52.3637301 Aspergillus 5052 Fungi Fungi 520 7.0899999999999985e-143   NTclustered gi|1144187|gb|U29632.1|ARU29632 5064 g514 i0 97.993 90.6060606060606 299 6 91 0 1 299 52 350 Aspergillus restrictus NRRL 145 28S ribosomal RNA gene, D1-D2 region blastn 29900 525 0.990476190476191 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus restrictus
25218345 25218345 PRJEB6055_S_NODE_1300_length_251_cov_425.157407_g1276_i0 PRJEB6055 1300 251 425.157407 1067.14509157 root 1 Root_unresolved Root_unresolved 459 1.1499999999999996e-124   NTclustered gi|193072614|dbj|AB293446.1| 4932 g1276 i0 100 117.474103585657 248 0 99 0 4 251 43657 43410 Saccharomyces cerevisiae gene for aquaporin Aqy1, complete cds, clone: COS5 blastn 29486 459 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
30943228 30943228 PRJEB6055_S_NODE_3994_length_174_cov_1.438849_g3970_i0 PRJEB6055 3994 174 1.438849 2.50359726 root 1 Root_unresolved Root_unresolved 41.6 0.00519   NR XP_019038176.1 683960 g3970 i0 60 1.06896551724138 30 11 51.7 1 171 82 29 57 XP_019038176.1 uncharacterized protein WICANDRAFT_63473 [Wickerhamomyces anomalus NRRL Y-366-8] diamond 186 41.6 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces anomalus
31487546 31487546 PRJEB6055_S_NODE_976_length_278_cov_9.740741_g952_i0 PRJEB6055 976 278 9.740741 27.07925998 Yarrowia lipolytica 4952 Fungi Fungi 41.6 0.0271   NR KAE8168712.1 4952 g952 i0 78.3 0.485611510791367 23 5 24.8 0 223 155 31 53 KAE8168712.1 hypothetical protein BKA90DRAFT_10915 [Yarrowia lipolytica] diamond 135 41.6 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica
32499923 32499923 PRJEB6055_S_NODE_2399_length_206_cov_3.403509_g2375_i0 PRJEB6055 2399 206 3.403509 7.01122854 Byssothecium circinans 147558 Fungi Fungi 45.4 2.35e-4   NR KAF1948084.1 147558 g2375 i0 59.5 1.09223300970874 37 15 53.9 0 90 200 9 45 KAF1948084.1 hypothetical protein CC80DRAFT_57283 [Byssothecium circinans] diamond 225 45.4 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Massarinaceae Byssothecium Byssothecium circinans
32745242 32745242 PRJEB6055_S_NODE_1880_length_223_cov_5.643617_g1856_i0 PRJEB6055 1880 223 5.643617 12.58526591 Saccharomycetaceae 4893 Fungi Fungi 54.3 6.08e-7   NR KAF4001137.1 4932 g1856 i0 52.5 4.0762331838565 61 19 82.1 1 12 194 56 106 KAF4001137.1 Protein TAR1 domain protein [Saccharomyces cerevisiae] diamond 909 54.7 0.992687385740402 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;