RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB6055", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB6055 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11603984 11603984 PRJEB6055_S_NODE_950_length_279_cov_15034.200820_g926_i0 PRJEB6055 950 279 15034.20082 41945.4202878 Philodina citrina 468664 Rotifera other_Eukaryota 237 6.61e-58   NTclustered gi|407227484|emb|FR856884.1| 468664 g926 i0 87.264 16.8494623655914 212 22 75 4 71 279 9667 9458 Philodina citrina complete mitochondrial genome blastn 4701 237 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
16702229 16702229 PRJEB6055_S_NODE_4194_length_171_cov_4.625000_g4170_i0 PRJEB6055 4194 171 4.625 7.90875 Adineta vaga 104782 Rotifera other_Eukaryota 178 2.26e-40   NTclustered gi|259129963|gb|GQ398061.1| 104782 g4170 i0 86.31 1.95321637426901 168 18 96 3 7 170 6540 6374 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 334 178 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
21802277 21802277 PRJEB6055_S_NODE_1818_length_225_cov_4.915789_g1794_i0 PRJEB6055 1818 225 4.915789 11.06052525 Rotaria rotatoria 231624 Rotifera other_Eukaryota 237 5.15e-58   NTclustered gi|270267490|ref|NC_013568.1| 231624 g1794 i0 89.84 3.55111111111111 187 16 83 3 40 225 2423 2239 Rotaria rotatoria mitochondrion, complete genome blastn 799 237 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
26907079 26907079 PRJEB6055_S_NODE_4362_length_169_cov_1.335821_g4338_i0 PRJEB6055 4362 169 1.335821 2.25753749 Adineta ricciae 249248 Rotifera other_Eukaryota 74.3 7.62e-14   NR CAF1267090.1 249248 g4338 i0 83.8 1.97041420118343 37 6 65.7 0 168 58 320 356 CAF1267090.1 unnamed protein product [Adineta ricciae] diamond 333 74.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32056690 32056690 PRJEB6055_S_NODE_2498_length_203_cov_5.738095_g2474_i0 PRJEB6055 2498 203 5.738095 11.64833285 Adineta steineri 433720 Rotifera other_Eukaryota 76.3 7.54e-15   NR CAF0713792.1 433720 g2474 i0 72.9 3.54679802955665 48 13 70.9 0 201 58 146 193 CAF0713792.1 unnamed protein product [Adineta steineri] diamond 720 76.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;