RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6055", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB6055 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14153937 14153937 PRJEB6055_S_NODE_1152_length_261_cov_3.238938_g1128_i0 PRJEB6055 1152 261 3.238938 8.45362818 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 6.48e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g1128 i0 88.043 4.7088122605364 92 6 35 5 12 102 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 1229 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
16702225 16702225 PRJEB6055_S_NODE_3114_length_189_cov_1.311688_g3090_i0 PRJEB6055 3114 189 1.311688 2.47909032 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 139 1.21e-28   NTclustered gi|1085197446|ref|XR_001974451.1| 508771 g3090 i0 88.235 5.05291005291005 119 11 62 3 57 173 61 178 Toxoplasma gondii ME49 28S ribosomal RNA rRNA blastn 955 139 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;