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contig_metadata

7 rows where bioproject = "PRJEB6054" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6054 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26203554 26203554 PRJEB6054_S_NODE_1918_length_309_cov_996.821168_g1829_i0 PRJEB6054 1918 309 996.821168 3080.17740912 archaeon 1906665 Archaea Archaea 118 7.329999999999999e-31   NR RYH25290.1 1906665 g1829 i0 88.1 0.572815533980582 59 7 57.3 0 309 133 148 206 RYH25290.1 MAG: 50S ribosomal protein L16 [archaeon] diamond 177 118 1 Archaea               archaeon
26475538 26475538 PRJEB6054_S_NODE_11632_length_167_cov_1.371212_g11543_i0 PRJEB6054 11632 167 1.371212 2.28992404 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.014   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g11543 i0 100 0.167664670658683 28 0 17 0 34 61 141713 141740 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
32911625 32911625 PRJEB6054_S_NODE_10961_length_171_cov_1.801471_g10872_i0 PRJEB6054 10961 171 1.801471 3.08051541 archaeon 1906665 Archaea Archaea 47.8 1.07e-4   NR RYH03712.1 1906665 g10872 i0 95.5 0.385964912280702 22 1 38.6 0 2 67 137 158 RYH03712.1 MAG: hypothetical protein EON65_47145 [archaeon] diamond 66 47.8 1 Archaea               archaeon
32997172 32997172 PRJEB6054_S_NODE_4211_length_234_cov_4.311558_g4122_i0 PRJEB6054 4211 234 4.311558 10.08904572 archaeon 1906665 Archaea Archaea 73.9 4.54e-15   NR RYH00022.1 1906665 g4122 i0 75.4 0.782051282051282 61 15 78.2 0 232 50 38 98 RYH00022.1 MAG: hypothetical protein EON65_49750 [archaeon] diamond 183 73.9 1 Archaea               archaeon
33065351 33065351 PRJEB6054_S_NODE_11589_length_167_cov_2.651515_g11500_i0 PRJEB6054 11589 167 2.651515 4.42803005 archaeon 1906665 Archaea Archaea 80.5 2.82e-16   NR RYG65852.1 1906665 g11500 i0 79.1 0.772455089820359 43 9 77.2 0 162 34 268 310 RYG65852.1 MAG: hypothetical protein EON64_11065 [archaeon] diamond 129 80.5 1 Archaea               archaeon
33133768 33133768 PRJEB6054_S_NODE_8815_length_183_cov_3.398649_g8726_i0 PRJEB6054 8815 183 3.398649 6.21952767 archaeon 1906665 Archaea Archaea 47.8 1.14e-5   NR RYG69863.1 1906665 g8726 i0 95 0.639344262295082 20 1 32.8 0 3 62 13 32 RYG69863.1 MAG: hypothetical protein EON64_01665 [archaeon] diamond 117 47.8 1 Archaea               archaeon
33150744 33150744 PRJEB6054_S_NODE_8016_length_189_cov_1.876623_g7927_i0 PRJEB6054 8016 189 1.876623 3.54681747 archaeon 1906665 Archaea Archaea 46.2 3.01e-4   NR RYY73917.1 1906665 g7927 i0 100 0.444444444444444 28 0 44.4 0 43 126 91 118 RYY73917.1 MAG: 50S ribosomal protein P1 [archaeon] diamond 84 46.2 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;