RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6054" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB6054 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26160047 26160047 PRJEB6054_S_NODE_15437_length_152_cov_1.709402_g15348_i0 PRJEB6054 15437 152 1.709402 2.59829104 Ecytonucleospora 3078583 Fungi Fungi 185 1.17e-42   NTclustered gi|1023344233|gb|KU198278.1| 546761 g15348 i0 91.729 87.0526315789474 133 11 88 0 1 133 267 399 Uncultured Enterocytozoonidae isolate EHPAAHL01 small subunit ribosomal RNA gene, partial sequence blastn 13232 185 1 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Enterocytozoonidae
26339277 26339277 PRJEB6054_S_NODE_1351_length_344_cov_9.721683_g1262_i0 PRJEB6054 1351 344 9.721683 33.44258952 Enterocytozoon hepatopenaei 646526 Fungi Fungi 219 3.0299999999999993e-52   NTclustered gi|2522768008|gb|OR162445.1| 646526 g1262 i0 95.62 0.656976744186046 137 5 65 1 14 149 3342 3206 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 226 219 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;