contig_metadata
21 rows where bioproject = "PRJEB6054" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25659127 | 25659127 | PRJEB6054_S_NODE_6666_length_201_cov_76658.716867_g6577_i0 | PRJEB6054 | 6666 | 201 | 76658.716867 | 154084.02090267 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 235 | 1.62e-57 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g6577 | i0 | 98.496 | 59.4129353233831 | 133 | 2 | 66 | 0 | 1 | 133 | 121195 | 121327 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 11942 | 235 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 25751791 | 25751791 | PRJEB6054_S_NODE_10594_length_173_cov_2.550725_g10505_i0 | PRJEB6054 | 10594 | 173 | 2.550725 | 4.41275425 | Thomasclavelia | 3025755 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2099439025|gb|CP083622.1| | 1547 | g10505 | i0 | 100 | 1.45664739884393 | 28 | 0 | 16 | 0 | 40 | 67 | 1492628 | 1492655 | Thomasclavelia ramosa strain FDAARGOS_1519 chromosome, complete genome | blastn | 252 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Thomasclavelia | Thomasclavelia ramosa | ||
| 25751898 | 25751898 | PRJEB6054_S_NODE_6586_length_202_cov_75868.167665_g6497_i0 | PRJEB6054 | 6586 | 202 | 75868.167665 | 153253.6986833 | Leuconostoc | 1243 | Bacteria | Bacteria | 241 | 3.5e-59 | NTclustered | gi|2531778937|gb|OR234663.1| | 1245 | g6497 | i0 | 100 | 64.3564356435644 | 130 | 0 | 64 | 0 | 73 | 202 | 448 | 319 | Leuconostoc mesenteroides strain M1L5 16S ribosomal RNA gene, partial sequence | blastn | 13000 | 241 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 25751907 | 25751907 | PRJEB6054_S_NODE_794_length_403_cov_35877.758152_g707_i0 | PRJEB6054 | 794 | 403 | 35877.758152 | 144587.36535256 | Streptococcus | 1301 | Bacteria | Bacteria | 575 | 1.8499999999999994e-159 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g707 | i0 | 99.682 | 264.124069478908 | 314 | 1 | 78 | 0 | 74 | 387 | 951384 | 951697 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 106442 | 580 | 0.991379310344828 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 25795188 | 25795188 | PRJEB6054_S_NODE_7147_length_197_cov_1.697531_g7058_i0 | PRJEB6054 | 7147 | 197 | 1.697531 | 3.34413607 | uncultured Acetobacterium sp. | 217139 | Bacteria | Bacteria | 58.4 | 3.67e-4 | NTclustered | gi|2907625634|emb|OZ223194.1| | 217139 | g7058 | i0 | 97.059 | 0.17258883248731 | 34 | 1 | 17 | 0 | 4 | 37 | 1102498 | 1102531 | MAG: uncultured Acetobacterium sp. isolate 6abcf8f7-2dc5-46ce-9e35-983ba889e1c3 genome assembly, chromosome: 4 | blastn | 34 | 58.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Acetobacterium | uncultured Acetobacterium sp. | ||
| 25887571 | 25887571 | PRJEB6054_S_NODE_1315_length_348_cov_4.293930_g1226_i0 | PRJEB6054 | 1315 | 348 | 4.29393 | 14.9428764 | Leuconostoc | 1243 | Bacteria | Bacteria | 547 | 3.4499999999999984e-151 | NTclustered | gi|1799531339|gb|CP028255.1| | 1245 | g1226 | i0 | 100 | 300.252873563218 | 296 | 0 | 85 | 0 | 53 | 348 | 68046 | 67751 | Leuconostoc mesenteroides strain SRCM102735 chromosome, complete genome | blastn | 104488 | 547 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 25887653 | 25887653 | PRJEB6054_S_NODE_5899_length_211_cov_72812.630682_g5810_i0 | PRJEB6054 | 5899 | 211 | 72812.630682 | 153634.65073902 | Leuconostoc | 1243 | Bacteria | Bacteria | 257 | 3.66e-64 | NTclustered | gi|1721205965|gb|CP042420.1| | 1246 | g5810 | i0 | 100 | 228.327014218009 | 139 | 0 | 66 | 0 | 1 | 139 | 450556 | 450418 | Leuconostoc lactis strain CBA3622 chromosome, complete genome | blastn | 48177 | 257 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc lactis | ||
| 25887671 | 25887671 | PRJEB6054_S_NODE_795_length_403_cov_35876.394022_g708_i0 | PRJEB6054 | 795 | 403 | 35876.394022 | 144581.86790866 | Streptococcus | 1301 | Bacteria | Bacteria | 564 | 4.009999999999999e-156 | NTclustered | gi|470489451|ref|NR_076930.1| | 1318 | g708 | i0 | 99.045 | 448.285359801489 | 314 | 3 | 78 | 0 | 74 | 387 | 316 | 3 | Streptococcus parasanguinis strain FW213 23S ribosomal RNA gene, complete sequence | blastn | 180659 | 564 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus parasanguinis | ||
| 26023870 | 26023870 | PRJEB6054_S_NODE_2172_length_297_cov_6.923664_g2083_i0 | PRJEB6054 | 2172 | 297 | 6.923664 | 20.56328208 | Staphylococcus | 1279 | Bacteria | Bacteria | 508 | 1.36e-139 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g2083 | i0 | 99.288 | 520.851851851852 | 281 | 2 | 95 | 0 | 17 | 297 | 748412 | 748692 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 154693 | 508 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 26023884 | 26023884 | PRJEB6054_S_NODE_3420_length_253_cov_22.188073_g3331_i0 | PRJEB6054 | 3420 | 253 | 22.188073 | 56.13582469 | Leuconostoc | 1243 | Bacteria | Bacteria | 427 | 3.26e-115 | NTclustered | gi|2623580878|gb|CP137625.1| | 1245 | g3331 | i0 | 99.573 | 321.628458498024 | 234 | 1 | 92 | 0 | 18 | 251 | 24477 | 24710 | Leuconostoc mesenteroides strain FFL48 chromosome, complete genome | blastn | 81372 | 431 | 0.990719257540603 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 26160122 | 26160122 | PRJEB6054_S_NODE_549_length_448_cov_3.646489_g471_i0 | PRJEB6054 | 549 | 448 | 3.646489 | 16.33627072 | Streptococcus | 1301 | Bacteria | Bacteria | 645 | 1.5599999999999995e-180 | NTclustered | gi|2190833561|gb|CP035238.1| | 1313 | g471 | i0 | 93.735 | 307.792410714286 | 431 | 25 | 96 | 2 | 1 | 429 | 17691 | 18121 | Streptococcus pneumoniae strain TVO_D39 chromosome, complete genome | blastn | 137891 | 645 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 26339388 | 26339388 | PRJEB6054_S_NODE_2983_length_266_cov_3.606061_g2894_i0 | PRJEB6054 | 2983 | 266 | 3.606061 | 9.59212226 | Neobacillus sp. Marseille-Q6967 | 2963105 | Bacteria | Bacteria | 145 | 3.9e-30 | NTclustered | gi|2290158417|emb|OX267715.1| | 2963105 | g2894 | i0 | 81.818 | 773.109022556391 | 176 | 28 | 65 | 4 | 94 | 266 | 781611 | 781437 | Neobacillus sp. Marseille-Q6967 genome assembly, chromosome: contig00001 | blastn | 205647 | 145 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Neobacillus | Neobacillus sp. Marseille-Q6967 | ||
| 26339605 | 26339605 | PRJEB6054_S_NODE_9703_length_179_cov_2.694444_g9614_i0 | PRJEB6054 | 9703 | 179 | 2.694444 | 4.82305476 | Exiguobacterium sp. 9-2 | 3112419 | Bacteria | Bacteria | 183 | 5.15e-42 | NTclustered | gi|2663195100|gb|CP142850.1| | 3112419 | g9614 | i0 | 85.475 | 595.810055865922 | 179 | 22 | 100 | 2 | 1 | 179 | 32210 | 32384 | Exiguobacterium sp. 9-2 chromosome, complete genome | blastn | 106650 | 183 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium sp. 9-2 | |||
| 26431743 | 26431743 | PRJEB6054_S_NODE_15935_length_150_cov_1.495652_g15846_i0 | PRJEB6054 | 15935 | 150 | 1.495652 | 2.243478 | root | 1 | Root_unresolved | Root_unresolved | 217 | 4.089999999999999e-52 | NTclustered | gi|1799531339|gb|CP028255.1| | 1245 | g15846 | i0 | 100 | 433.113333333333 | 117 | 0 | 78 | 0 | 1 | 117 | 70010 | 70126 | Leuconostoc mesenteroides strain SRCM102735 chromosome, complete genome | blastn | 64967 | 217 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 26431814 | 26431814 | PRJEB6054_S_NODE_5807_length_213_cov_3.112360_g5718_i0 | PRJEB6054 | 5807 | 213 | 3.11236 | 6.6293268 | Bacteria | 2 | Bacteria | Bacteria | 67.6 | 6.69e-7 | NTclustered | gi|1858325381|gb|CP054612.1| | 375489 | g5718 | i0 | 90.196 | 10.7417840375587 | 51 | 5 | 24 | 0 | 1 | 51 | 318284 | 318234 | Paenibacillus cellulosilyticus strain KACC 14175 chromosome, complete genome | blastn | 2288 | 67.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus cellulosilyticus | ||
| 26475789 | 26475789 | PRJEB6054_S_NODE_5776_length_213_cov_2092.073034_g5687_i0 | PRJEB6054 | 5776 | 213 | 2092.073034 | 4456.11556242 | Aerococcus viridans | 1377 | Bacteria | Bacteria | 228 | 2.8999999999999996e-55 | NTclustered | gi|984726517|gb|CP014164.1| | 1377 | g5687 | i0 | 92.5 | 413.211267605634 | 160 | 10 | 75 | 2 | 55 | 213 | 25615 | 25773 | Aerococcus viridans strain CCUG4311, complete genome | blastn | 88014 | 228 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Aerococcus | Aerococcus viridans | ||
| 26567790 | 26567790 | PRJEB6054_S_NODE_14128_length_156_cov_2.115702_g14039_i0 | PRJEB6054 | 14128 | 156 | 2.115702 | 3.30049512 | Bacillati | 1783272 | Bacteria | Bacteria | 276 | 7e-70 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g14039 | i0 | 100 | 510.685897435897 | 149 | 0 | 96 | 0 | 1 | 149 | 751182 | 751330 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 79667 | 276 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 32911639 | 32911639 | PRJEB6054_S_NODE_12969_length_161_cov_1.309524_g12880_i0 | PRJEB6054 | 12969 | 161 | 1.309524 | 2.10833364 | uncultured Clostridium sp. | 59620 | Bacteria | Bacteria | 98.6 | 3.29e-24 | NR | WP_297636592.1 | 59620 | g12880 | i0 | 88.7 | 1.97515527950311 | 53 | 6 | 98.8 | 0 | 2 | 160 | 57 | 109 | WP_297636592.1 phage virion morphogenesis protein [uncultured Clostridium sp.] | diamond | 318 | 98.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | uncultured Clostridium sp. | ||
| 32945964 | 32945964 | PRJEB6054_S_NODE_11578_length_167_cov_3.795455_g11489_i0 | PRJEB6054 | 11578 | 167 | 3.795455 | 6.33840985 | uncultured Clostridium sp. | 59620 | Bacteria | Bacteria | 92 | 4.4599999999999996e-23 | NR | WP_297636655.1 | 59620 | g11489 | i0 | 93.9 | 0.880239520958084 | 49 | 3 | 88 | 0 | 165 | 19 | 10 | 58 | WP_297636655.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein [uncultured Clostridium sp.] | diamond | 147 | 92 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | uncultured Clostridium sp. | ||
| 32974477 | 32974477 | PRJEB6054_S_NODE_11298_length_169_cov_1.641791_g11209_i0 | PRJEB6054 | 11298 | 169 | 1.641791 | 2.77462679 | root | 1 | Root_unresolved | Root_unresolved | 75.5 | 1.22e-15 | NR | MRB67472.1 | 1428 | g11209 | i0 | 70 | 21.5147928994083 | 50 | 15 | 88.8 | 0 | 169 | 20 | 85 | 134 | MRB67472.1 hypothetical protein [Bacillus thuringiensis] | diamond | 3636 | 75.9 | 0.994729907773386 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 33008467 | 33008467 | PRJEB6054_S_NODE_7587_length_193_cov_1.968354_g7498_i0 | PRJEB6054 | 7587 | 193 | 1.968354 | 3.79892322 | Bacteria | 2 | Bacteria | Bacteria | 101 | 1.84e-26 | NR | MCB2621775.1 | 1639 | g7498 | i0 | 94.1 | 18.2331606217617 | 51 | 3 | 79.3 | 0 | 193 | 41 | 15 | 65 | MCB2621775.1 fumarate hydratase [Listeria monocytogenes] | diamond | 3519 | 102 | 0.990196078431373 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;