RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6054", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB6054 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25615553 25615553 PRJEB6054_S_NODE_2697_length_275_cov_1297.929167_g2608_i0 PRJEB6054 2697 275 1297.929167 3569.30520925 Metazoa 33208 Porifera other_Eukaryota 99 3.2e-16   NTclustered gi|1284883228|gb|KY825184.1| 178514 g2608 i0 79.452 20.88 146 24 52 4 110 253 3474 3333 Amphimedon compressa voucher MNRJ:18771 internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence blastn 5742 99 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon compressa
32911688 32911688 PRJEB6054_S_NODE_6929_length_199_cov_1.884146_g6840_i0 PRJEB6054 6929 199 1.884146 3.74945054 Sycon ciliatum 27933 Porifera other_Eukaryota 42 0.0409   NR XP_065182304.1 27933 g6840 i0 41.8 0.829145728643216 55 32 82.9 0 190 26 496 550 XP_065182304.1 uncharacterized protein LOC135813015 [Sycon ciliatum] diamond 165 42 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;