RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB6054", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB6054 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26160063 26160063 PRJEB6054_S_NODE_293_length_529_cov_70.212551_g257_i0 PRJEB6054 293 529 70.212551 371.42439479 Conoidasida 1280412 SAR_Eukaryotes SAR_Eukaryotes 63.9 2.4e-5   NTclustered gi|81366051|gb|DQ227418.1| 94643 g257 i0 100 7.10775047258979 34 0 6 0 496 529 5667 5634 Besnoitia besnoiti from Spain 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3760 63.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
26295781 26295781 PRJEB6054_S_NODE_10022_length_177_cov_1.408451_g9933_i0 PRJEB6054 10022 177 1.408451 2.49295827 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 148 1.85e-31   NTclustered gi|157366229|gb|EF666482.1| 158379 g9933 i0 82.486 97.728813559322 177 24 100 5 1 177 4889 4720 Ascogregarina taiwanensis 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 26S ribosomal RNA and 5S ribosomal RNA genes, complete sequence blastn 17298 148 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Lecudinidae Ascogregarina Ascogregarina taiwanensis
33059625 33059625 PRJEB6054_S_NODE_13589_length_158_cov_0.975610_g13500_i0 PRJEB6054 13589 158 0.97561 1.5414638 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 60.5 4e-10   NR XP_013229778.1 5802 g13500 i0 63.5 1.9746835443038 52 19 98.7 0 1 156 47 98 XP_013229778.1 ribosomal protein L41, putative [Eimeria tenella] diamond 312 60.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;