RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB6054", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 6 ✖

tax_clade 1

  • Discoba · 6 ✖

bioproject 1

  • PRJEB6054 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25751787 25751787 PRJEB6054_S_NODE_10122_length_176_cov_3.843972_g10033_i0 PRJEB6054 10122 176 3.843972 6.76539072 Trypanosoma 5690 Euglenozoa other_Eukaryota 193 8.39e-45   NTclustered gi|1031970241|gb|CP015675.1| 85057 g10033 i0 88.679 85.1079545454545 159 16 90 2 1 158 403917 404074 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI25, partial sequence blastn 14979 193 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
25931195 25931195 PRJEB6054_S_NODE_1612_length_326_cov_10.426117_g1523_i0 PRJEB6054 1612 326 10.426117 33.98914142 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 398 3.4199999999999996e-106   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g1523 i0 90.096 135.199386503067 313 22 94 7 22 326 4803 4492 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 44075 398 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
26295789 26295789 PRJEB6054_S_NODE_11790_length_166_cov_1.351145_g11701_i0 PRJEB6054 11790 166 1.351145 2.2429007 Trypanosoma 5690 Euglenozoa other_Eukaryota 147 6.2e-31   NTclustered gi|662247341|gb|KJ742907.1| 5698 g11701 i0 93.878 71.6686746987952 98 5 58 1 69 165 9738 9835 Trypanosoma rangeli isolate SC58 intergenic spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S alpha ribosomal RNA gene, internal transcribed spacer 3, 28S gamma ribosomal RNA gene, internal transcribed spacer 4, 28S beta ribosomal RNA gene, internal transcribed spacer 5, 28S delta ribosomal RNA gene, internal transcribed spacer 6, and 28S zeta ribosomal RNA gene, complete sequence blastn 11897 148 0.993243243243243 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
32940165 32940165 PRJEB6054_S_NODE_13185_length_160_cov_0.960000_g13096_i0 PRJEB6054 13185 160 0.96 1.536 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 42 0.0161   NR EPY35978.1 28005 g13096 i0 83.3 5.85 24 4 45 0 156 85 147 170 EPY35978.1 small subunit ribosomal protein S16e [Strigomonas culicis] diamond 936 42 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
33031388 33031388 PRJEB6054_S_NODE_6740_length_201_cov_0.933735_g6651_i0 PRJEB6054 6740 201 0.933735 1.87680735 Angomonas deanei 59799 Euglenozoa other_Eukaryota 49.7 3.4e-5   NR EPY25395.1 59799 g6651 i0 52.1 0.716417910447761 48 23 71.6 0 201 58 114 161 EPY25395.1 nascent polypeptide-associated complex subunit alpha [Angomonas deanei] diamond 144 49.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
33059628 33059628 PRJEB6054_S_NODE_15933_length_150_cov_1.539130_g15844_i0 PRJEB6054 15933 150 1.53913 2.308695 Leishmania 5658 Euglenozoa other_Eukaryota 47.4 1.3e-4   NR GET88997.1 5689 g15844 i0 71.4 3.88 28 8 56 0 148 65 142 169 GET88997.1 ige-dependent histamine-releasing factor, putative [Leishmania tarentolae] diamond 582 47.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;