RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB58983", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB58983 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28132426 28132426 PRJEB58983_P_NODE_29505_length_249_cov_0.886364_g29090_i0 PRJEB58983 29505 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 42.7 0.0385   NR HII04504.1 2024843 g29090 i0 34.8 2.20481927710843 69 45 83.1 0 211 5 228 296 HII04504.1 hypothetical protein [Nitrosopumilus sp.] diamond 549 43.1 0.990719257540603 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32341682 32341682 PRJEB58983_P_NODE_28759_length_250_cov_3.971751_g28344_i0 PRJEB58983 28759 250 3.971751 9.9293775 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 54.3 3.19e-6   NR HWY35735.1 2202732 g28344 i0 44 0.9 75 42 90 0 239 15 249 323 HWY35735.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 225 54.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;