RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB58983" and tax_phylum = "Minisyncoccota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB58983 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17976806 17976806 PRJEB58983_P_NODE_7875_length_441_cov_2.095109_g7461_i0 PRJEB58983 7875 441 2.095109 9.23943069 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 470 9.93e-128   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g7461 i0 86.512 249.843537414966 430 54 97 4 14 441 76297 75870 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 110181 470 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
21801706 21801706 PRJEB58983_P_NODE_26798_length_257_cov_1.695652_g26383_i0 PRJEB58983 26798 257 1.695652 4.35782564 Minisyncoccota bacterium 2053589 Bacteria Bacteria 183 7.949999999999997e-42   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g26383 i0 88.312 116.622568093385 154 16 60 2 104 257 443358 443509 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 29972 183 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30286788 30286788 PRJEB58983_P_NODE_26752_length_257_cov_2.250000_g26337_i0 PRJEB58983 26752 257 2.25 5.7825 Candidatus Pacebacteria bacterium CG_4_9_14_ 1974763 Bacteria Bacteria 47 1.24e-4   NR PJC42680.1 1974763 g26337 i0 53.8 0.898832684824903 39 18 45.5 0 118 2 21 59 PJC42680.1 MAG: hypothetical protein CO040_03150 [Candidatus Pacebacteria bacterium CG_4_9_14_0_2_um_filter_36_8] diamond 231 47 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Candidatus Pacebacteria bacterium CG_4_9_14_0_2_um_filter_36_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;