RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB58983", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB58983 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5227552 5227552 PRJEB58983_P_NODE_27945_length_253_cov_0.866667_g27530_i0 PRJEB58983 27945 253 0.866667 2.19266751 Tombusviridae sp. 2583950 Viruses Viruses 231 2.75e-56   NTclustered gi|2171146054|gb|MZ218543.1| 2583950 g27530 i0 86.792 0.837944664031621 212 23 83 5 5 213 51 260 MAG: Tombusviridae sp. isolate 277-k141_9923 genomic sequence blastn 212 231 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Tombusviridae sp.
27760516 27760516 PRJEB58983_P_NODE_9124_length_412_cov_2.902655_g8710_i0 PRJEB58983 9124 412 2.902655 11.9589386 Digyalum oweni associated virus 3004187 Viruses Viruses 102 2.52e-22   NR CAI9240335.1 3004187 g8710 i0 43 0.932038834951456 128 67 92.5 2 382 2 670 792 CAI9240335.1 polyprotein, partial [Digyalum oweni associated virus] diamond 384 102 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales     Digyalum oweni associated virus
28012946 28012946 PRJEB58983_P_NODE_11705_length_368_cov_2.162712_g11290_i0 PRJEB58983 11705 368 2.162712 7.95878016 Digyalum oweni associated virus 3004187 Viruses Viruses 47 0.00505   NR CAI9240335.1 3004187 g11290 i0 28.8 1.01902173913043 125 71 94.6 4 363 16 226 341 CAI9240335.1 polyprotein, partial [Digyalum oweni associated virus] diamond 375 47 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales     Digyalum oweni associated virus
28549715 28549715 PRJEB58983_P_NODE_16667_length_314_cov_3.278008_g16252_i0 PRJEB58983 16667 314 3.278008 10.29294512 Harrimaniidae flavivirus 3004160 Viruses Viruses 43.9 0.0353   NR CAI5755626.1 3004160 g16252 i0 35.7 0.802547770700637 84 47 77.4 4 27 269 1784 1863 CAI5755626.1 polyprotein, partial [Harrimaniidae flavivirus] diamond 252 43.9 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Harrimaniidae flavivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;