contig_metadata
18 rows where bioproject = "PRJEB58983", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125041 | 125041 | PRJEB58983_P_NODE_32221_length_242_cov_2.106509_g31806_i0 | PRJEB58983 | 32221 | 242 | 2.106509 | 5.09775178 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 142 | 3.25e-41 | NR | GJM17675.1 | 2202153 | g31806 | i0 | 87.3 | 2.96280991735537 | 79 | 10 | 97.9 | 0 | 242 | 6 | 77 | 155 | GJM17675.1 MAG: hypothetical protein DHS20C13_30020 [Thermodesulfobacteriota bacterium] | diamond | 717 | 142 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 992130 | 992130 | PRJEB58983_P_NODE_25661_length_262_cov_1.280423_g25246_i0 | PRJEB58983 | 25661 | 262 | 1.280423 | 3.35470826 | Desulfocapsaceae | 2886822 | Bacteria | Bacteria | 110 | 1.4e-19 | NTclustered | gi|2557433592|gb|CP050700.1| | 2653858 | g25246 | i0 | 88.889 | 19.9198473282443 | 90 | 8 | 34 | 2 | 16 | 104 | 5809087 | 5809175 | Desulfopila sp. IMCC35008 chromosome, complete genome | blastn | 5219 | 110 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfopila | Desulfopila sp. IMCC35008 | ||
| 5227583 | 5227583 | PRJEB58983_P_NODE_29605_length_248_cov_2.668571_g29190_i0 | PRJEB58983 | 29605 | 248 | 2.668571 | 6.61805608 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 124 | 4.6899999999999996e-24 | NTclustered | gi|2621705002|emb|OY762289.1| | 2049043 | g29190 | i0 | 79.365 | 107.689516129032 | 189 | 30 | 75 | 7 | 62 | 246 | 713055 | 713238 | MAG: Desulfovibrionaceae bacterium isolate 1e2121d5-5174-4668-bae3-9852897706ae genome assembly, chromosome: 1 | blastn | 26707 | 124 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium | |||
| 9051857 | 9051857 | PRJEB58983_P_NODE_10968_length_379_cov_2.395425_g10553_i0 | PRJEB58983 | 10968 | 379 | 2.395425 | 9.07866075 | Geoalkalibacter subterraneus | 483547 | Bacteria | Bacteria | 385 | 3.14e-102 | NTclustered | gi|749207097|gb|CP010311.1| | 483547 | g10553 | i0 | 85.224 | 207.018469656992 | 379 | 50 | 99 | 6 | 3 | 379 | 2609394 | 2609768 | Geoalkalibacter subterraneus strain Red1, complete genome | blastn | 78460 | 385 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter subterraneus | ||
| 9051974 | 9051974 | PRJEB58983_P_NODE_16628_length_315_cov_1.190083_g16213_i0 | PRJEB58983 | 16628 | 315 | 1.190083 | 3.74876145 | Geoalkalibacter subterraneus | 483547 | Bacteria | Bacteria | 257 | 5.8200000000000005e-64 | NTclustered | gi|749207097|gb|CP010311.1| | 483547 | g16213 | i0 | 85.433 | 112.946031746032 | 254 | 29 | 79 | 6 | 4 | 251 | 2609607 | 2609356 | Geoalkalibacter subterraneus strain Red1, complete genome | blastn | 35578 | 257 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geoalkalibacteraceae | Geoalkalibacter | Geoalkalibacter subterraneus | ||
| 12878607 | 12878607 | PRJEB58983_P_NODE_28171_length_252_cov_1.681564_g27756_i0 | PRJEB58983 | 28171 | 252 | 1.681564 | 4.23754128 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 138 | 3.55e-38 | NR | RMF17518.1 | 2080303 | g27756 | i0 | 77.1 | 7.80952380952381 | 83 | 18 | 98.8 | 1 | 252 | 4 | 104 | 185 | RMF17518.1 MAG: adenosylhomocysteinase, partial [Candidatus Dadabacteria bacterium] | diamond | 1968 | 138 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 14153599 | 14153599 | PRJEB58983_P_NODE_6572_length_481_cov_2.549020_g6158_i0 | PRJEB58983 | 6572 | 481 | 2.54902 | 12.2607862 | uncultured Desulfobacterium sp. | 201089 | Bacteria | Bacteria | 224 | 9.379999999999999e-54 | NTclustered | gi|2621713419|emb|OY771474.1| | 201089 | g6158 | i0 | 76.008 | 132.047817047817 | 471 | 91 | 96 | 17 | 1 | 459 | 1758350 | 1758810 | MAG: uncultured Desulfobacterium sp. isolate 2c08e38e-77a0-468a-b8ca-c683eacf49f2 genome assembly, chromosome: 1 | blastn | 63515 | 224 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteriaceae | Desulfobacterium | uncultured Desulfobacterium sp. | ||
| 21394201 | 21394201 | PRJEB58983_P_NODE_29677_length_248_cov_1.954286_g29262_i0 | PRJEB58983 | 29677 | 248 | 1.954286 | 4.84662928 | Geotalea | 2910589 | Bacteria | Bacteria | 292 | 1.21e-74 | NTclustered | gi|221562406|gb|CP001390.1| | 316067 | g29262 | i0 | 90.498 | 171.733870967742 | 221 | 21 | 89 | 0 | 28 | 248 | 2115197 | 2114977 | Geobacter daltonii FRC-32, complete genome | blastn | 42590 | 292 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea daltonii | ||
| 21801628 | 21801628 | PRJEB58983_P_NODE_23618_length_271_cov_3.040404_g23203_i0 | PRJEB58983 | 23618 | 271 | 3.040404 | 8.23949484 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 189 | 1.8199999999999998e-43 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g23203 | i0 | 87.349 | 120.516605166052 | 166 | 20 | 61 | 1 | 96 | 261 | 1711957 | 1711793 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 32660 | 189 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 21801742 | 21801742 | PRJEB58983_P_NODE_28458_length_251_cov_2.157303_g28043_i0 | PRJEB58983 | 28458 | 251 | 2.157303 | 5.41483053 | uncultured Desulfuromonas sp. | 181013 | Bacteria | Bacteria | 159 | 1.3e-34 | NTclustered | gi|2621704006|emb|OY762961.1| | 181013 | g28043 | i0 | 82.796 | 2.14741035856574 | 186 | 24 | 73 | 7 | 5 | 186 | 318391 | 318572 | MAG: uncultured Desulfuromonas sp. isolate cad01da2-5f99-43ef-8b90-e7e0a75d6a39 genome assembly, chromosome: 1 | blastn | 539 | 159 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | uncultured Desulfuromonas sp. | ||
| 21801880 | 21801880 | PRJEB58983_P_NODE_35498_length_202_cov_4.821705_g35083_i0 | PRJEB58983 | 35498 | 202 | 4.821705 | 9.7398441 | Desulfosarcina alkanivorans | 571177 | Bacteria | Bacteria | 176 | 1e-39 | NTclustered | gi|1773409569|dbj|AP021874.1| | 571177 | g35083 | i0 | 86.228 | 97.1831683168317 | 167 | 17 | 81 | 5 | 1 | 164 | 2620235 | 2620398 | Desulfosarcina alkanivorans PL12 DNA, complete genome | blastn | 19631 | 176 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina alkanivorans | ||
| 28006216 | 28006216 | PRJEB58983_P_NODE_25345_length_263_cov_2.557895_g24930_i0 | PRJEB58983 | 25345 | 263 | 2.557895 | 6.72726385 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 78.2 | 9.31e-15 | NR | WP_028573666.1 | 53245 | g24930 | i0 | 95 | 7.75665399239544 | 40 | 2 | 45.6 | 0 | 144 | 263 | 1 | 40 | WP_028573666.1 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) [Desulfonatronovibrio hydrogenovorans] | diamond | 2040 | 78.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfonatronovibrionaceae | Desulfonatronovibrio | Desulfonatronovibrio hydrogenovorans | ||
| 28896709 | 28896709 | PRJEB58983_P_NODE_10288_length_390_cov_2.082019_g9873_i0 | PRJEB58983 | 10288 | 390 | 2.082019 | 8.1198741 | Geomonas fuzhouensis | 2847989 | Bacteria | Bacteria | 168 | 5.999999999999999e-49 | NR | WP_224957445.1 | 2873701 | g9873 | i0 | 62 | 3.92307692307692 | 129 | 49 | 99.2 | 0 | 4 | 390 | 90 | 218 | WP_224957445.1 branched-chain amino acid transaminase [Geomonas fuzhouensis] | diamond | 1530 | 168 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas fuzhouensis | ||
| 29048070 | 29048070 | PRJEB58983_P_NODE_23988_length_270_cov_0.923858_g23573_i0 | PRJEB58983 | 23988 | 270 | 0.923858 | 2.4944166 | Desulfovibrio | 872 | Bacteria | Bacteria | 75.9 | 1.79e-14 | NR | NMC49336.1 | 885 | g23573 | i0 | 54.1 | 3.38888888888889 | 61 | 28 | 67.8 | 0 | 80 | 262 | 1 | 61 | NMC49336.1 nickel pincer cofactor biosynthesis protein LarB [Desulfovibrio sp.] | diamond | 915 | 76.3 | 0.99475753604194 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. | ||
| 31170789 | 31170789 | PRJEB58983_P_NODE_14335_length_336_cov_1.942966_g13920_i0 | PRJEB58983 | 14335 | 336 | 1.942966 | 6.52836576 | Syntrophales bacterium | 2928017 | Bacteria | Bacteria | 182 | 1.52e-51 | NR | MCU0530745.1 | 2928017 | g13920 | i0 | 82.9 | 1.98214285714286 | 111 | 18 | 98.2 | 1 | 334 | 5 | 78 | 188 | MCU0530745.1 S8 family peptidase [Syntrophales bacterium] | diamond | 666 | 182 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophales bacterium | ||||
| 31613796 | 31613796 | PRJEB58983_P_NODE_27856_length_253_cov_1.316667_g27441_i0 | PRJEB58983 | 27856 | 253 | 1.316667 | 3.33116751 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 83.6 | 9.85e-17 | NR | MEW6657415.1 | 2202153 | g27441 | i0 | 58.1 | 1.75494071146245 | 74 | 21 | 86.6 | 3 | 34 | 252 | 13 | 77 | MEW6657415.1 toprim domain-containing protein [Thermodesulfobacteriota bacterium] | diamond | 444 | 83.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 31961718 | 31961718 | PRJEB58983_P_NODE_4178_length_598_cov_6.356190_g3770_i0 | PRJEB58983 | 4178 | 598 | 6.35619 | 38.0100162 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 155 | 2.9e-45 | NR | MCL1962067.1 | 2049043 | g3770 | i0 | 78.8 | 0.978260869565217 | 99 | 21 | 49.7 | 0 | 356 | 60 | 6 | 104 | MCL1962067.1 putative addiction module antidote protein [Desulfovibrionaceae bacterium] | diamond | 585 | 155 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium | |||
| 32751883 | 32751883 | PRJEB58983_P_NODE_1180_length_1182_cov_2.399459_g912_i0 | PRJEB58983 | 1180 | 1182 | 2.399459 | 28.36160538 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 68.9 | 6.64e-9 | NR | MFO7686422.1 | 2044940 | g912 | i0 | 26 | 0.682741116751269 | 269 | 186 | 67.5 | 7 | 357 | 1154 | 23 | 281 | MFO7686422.1 hypothetical protein [Desulfobacterales bacterium] | diamond | 807 | 68.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;