contig_metadata
6 rows where bioproject = "PRJEB58983" and tax_kingdom = "Methanobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5227656 | 5227656 | PRJEB58983_P_NODE_33905_length_232_cov_3.012579_g33490_i0 | PRJEB58983 | 33905 | 232 | 3.012579 | 6.98918328 | methanogenic archaeon mixed culture ISO4-G1 | 1452364 | Archaea | Archaea | 147 | 9.25e-31 | NTclustered | gi|998155847|gb|CP013703.1| | 1452364 | g33490 | i0 | 84.828 | 64.3146551724138 | 145 | 22 | 63 | 0 | 16 | 160 | 562449 | 562305 | Methanogenic archaeon mixed culture ISO4-G1 chromosome, complete genome | blastn | 14921 | 147 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | methanogenic archaeon mixed culture ISO4-G1 | |||
| 14153665 | 14153665 | PRJEB58983_P_NODE_9252_length_410_cov_1.029674_g8838_i0 | PRJEB58983 | 9252 | 410 | 1.029674 | 4.2216634 | root | 1 | Root_unresolved | Root_unresolved | 161 | 4.19e-44 | NR | MBX7076496.1 | 2099680 | g8838 | i0 | 62.6 | 1.8 | 123 | 46 | 90 | 0 | 370 | 2 | 128 | 250 | MBX7076496.1 F0F1 ATP synthase subunit alpha [Methanobacteriaceae archaeon] | diamond | 738 | 161 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobacteriaceae archaeon | ||
| 26843909 | 26843909 | PRJEB58983_P_NODE_34361_length_229_cov_2.673077_g33946_i0 | PRJEB58983 | 34361 | 229 | 2.673077 | 6.12134633 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 50.1 | 7.98e-5 | NR | RYE96869.1 | 2026739 | g33946 | i0 | 68.4 | 0.497816593886463 | 38 | 12 | 49.8 | 0 | 101 | 214 | 326 | 363 | RYE96869.1 MAG: hypothetical protein EOO41_04130, partial [Methanobacteriota archaeon] | diamond | 114 | 50.1 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 27539249 | 27539249 | PRJEB58983_P_NODE_30584_length_246_cov_1.589595_g30169_i0 | PRJEB58983 | 30584 | 246 | 1.589595 | 3.9104037 | Thermoplasmata archaeon | 1906666 | Archaea | Archaea | 95.9 | 2.51e-21 | NR | RLF38486.1 | 1906666 | g30169 | i0 | 68.7 | 3.41463414634146 | 67 | 21 | 81.7 | 0 | 242 | 42 | 3 | 69 | RLF38486.1 MAG: molecular chaperone DnaJ [Thermoplasmata archaeon] | diamond | 840 | 95.9 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Thermoplasmata archaeon | |||||
| 31930048 | 31930048 | PRJEB58983_P_NODE_16937_length_312_cov_2.322176_g16522_i0 | PRJEB58983 | 16937 | 312 | 2.322176 | 7.24518912 | Methanomassiliicoccales archaeon | 1906667 | Archaea | Archaea | 67.4 | 1.91e-10 | NR | MEM3851705.1 | 1906667 | g16522 | i0 | 80.5 | 1.61538461538462 | 41 | 8 | 39.4 | 0 | 150 | 28 | 55 | 95 | MEM3851705.1 leucine--tRNA ligase [Methanomassiliicoccales archaeon] | diamond | 504 | 67.4 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Methanomassiliicoccales | Methanomassiliicoccales archaeon | ||||
| 32877798 | 32877798 | PRJEB58983_P_NODE_2040_length_887_cov_2.379607_g1690_i0 | PRJEB58983 | 2040 | 887 | 2.379607 | 21.10711409 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 135 | 2.28e-33 | NR | RZD42880.1 | 2026739 | g1690 | i0 | 34.8 | 0.980834272829763 | 290 | 172 | 93.7 | 6 | 838 | 8 | 12 | 297 | RZD42880.1 MAG: hypothetical protein CXT73_02100 [Methanobacteriota archaeon] | diamond | 870 | 135 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;