RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB58983", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB58983 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2267445 2267445 PRJEB58983_P_NODE_9822_length_398_cov_2.827692_g9408_i0 PRJEB58983 9822 398 2.827692 11.25421416 Porifera 6040 Porifera other_Eukaryota 128 6.16e-25   NTclustered gi|55580999|emb|AJ620113.1| 55567 g9408 i0 80.702 26.6859296482412 171 28 42 5 231 398 1686 1518 Suberites domuncula partial 28S rRNA gene blastn 10621 128 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites domuncula
3950969 3950969 PRJEB58983_P_NODE_23484_length_272_cov_1.849246_g23069_i0 PRJEB58983 23484 272 1.849246 5.02994912 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 136 6.1e-37   NR ABB29639.1 86007 g23069 i0 71.1 43.6654411764706 90 26 99.3 0 271 2 41 130 ABB29639.1 endoplasmic reticulum heat shock 70 kDa protein, partial [Suberites ficus] diamond 11877 137 0.992700729927007 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites ficus
28991883 28991883 PRJEB58983_P_NODE_29228_length_249_cov_2.193182_g28813_i0 PRJEB58983 29228 249 2.193182 5.46102318 Geodia barretti 519541 Porifera other_Eukaryota 89.4 3.95e-20   NR CAI8030757.1 519541 g28813 i0 56.3 1.04819277108434 87 29 98.8 3 248 3 77 159 CAI8030757.1 hypothetical protein GBAR_LOCUS17449 [Geodia barretti] diamond 261 89.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
30595377 30595377 PRJEB58983_P_NODE_34433_length_228_cov_5.174194_g34018_i0 PRJEB58983 34433 228 5.174194 11.79716232 Opisthokonta 33154 Porifera other_Eukaryota 45.4 0.0034   NR XP_064382394.1 6063 g34018 i0 37.8 8.96052631578947 74 44 94.7 2 2 217 543 616 XP_064382394.1 uncharacterized protein LOC135331237 [Halichondria panicea] diamond 2043 45.8 0.991266375545852 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
30981654 30981654 PRJEB58983_P_NODE_17114_length_311_cov_1.201681_g16699_i0 PRJEB58983 17114 311 1.201681 3.73722791 Amphimedon queenslandica 400682 Porifera other_Eukaryota 79 8.3e-15   NR XP_003389037.1 400682 g16699 i0 39 2.01607717041801 105 60 98.4 2 306 1 23 126 XP_003389037.1 PREDICTED: cathepsin L1-like [Amphimedon queenslandica] diamond 627 79 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
32871087 32871087 PRJEB58983_P_NODE_26100_length_260_cov_1.663102_g25685_i0 PRJEB58983 26100 260 1.663102 4.3240652 Metazoa 33208 Porifera other_Eukaryota 100 1.63e-22   NR XP_064400598.1 6063 g25685 i0 67.6 7.61538461538461 68 22 78.5 0 260 57 150 217 XP_064400598.1 protein DD3-3-like [Halichondria panicea] diamond 1980 100 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;