contig_metadata
9 rows where bioproject = "PRJEB58983", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2267349 | 2267349 | PRJEB58983_P_NODE_21382_length_282_cov_2.406699_g20967_i0 | PRJEB58983 | 21382 | 282 | 2.406699 | 6.78689118 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 370 | 6.319999999999999e-98 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g20967 | i0 | 90.459 | 658.528368794326 | 283 | 24 | 99 | 3 | 2 | 282 | 29490 | 29771 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 185705 | 370 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 6095291 | 6095291 | PRJEB58983_P_NODE_32205_length_242_cov_2.195266_g31790_i0 | PRJEB58983 | 32205 | 242 | 2.195266 | 5.31254372 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 370 | 5.3e-98 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g31790 | i0 | 96.035 | 186.111570247934 | 227 | 9 | 94 | 0 | 16 | 242 | 28714 | 28488 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 45039 | 370 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 7777266 | 7777266 | PRJEB58983_P_NODE_19667_length_292_cov_1.082192_g19252_i0 | PRJEB58983 | 19667 | 292 | 1.082192 | 3.16000064 | Chthonomonadaceae bacterium | 2739509 | Bacteria | Bacteria | 172 | 1.06e-49 | NR | MBC7527023.1 | 2739509 | g19252 | i0 | 91.8 | 4.98287671232877 | 97 | 8 | 99.7 | 0 | 2 | 292 | 127 | 223 | MBC7527023.1 type II secretion system F family protein [Chthonomonadaceae bacterium] | diamond | 1455 | 172 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonadaceae bacterium | |||
| 12471126 | 12471126 | PRJEB58983_P_NODE_33030_length_238_cov_2.727273_g32615_i0 | PRJEB58983 | 33030 | 238 | 2.727273 | 6.49090974 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 339 | 1.4699999999999999e-88 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g32615 | i0 | 92.437 | 447.415966386555 | 238 | 17 | 100 | 1 | 1 | 238 | 28229 | 28465 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 106485 | 340 | 0.997058823529412 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 12878743 | 12878743 | PRJEB58983_P_NODE_34411_length_229_cov_2.134615_g33996_i0 | PRJEB58983 | 34411 | 229 | 2.134615 | 4.88826835 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 171 | 5.41e-38 | NTclustered | gi|2874253701|emb|OY969427.1| | 157466 | g33996 | i0 | 82.11 | 413.157205240175 | 218 | 22 | 92 | 10 | 1 | 211 | 3409098 | 3408891 | MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 | blastn | 94613 | 171 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 15019960 | 15019960 | PRJEB58983_P_NODE_26812_length_257_cov_1.646739_g26397_i0 | PRJEB58983 | 26812 | 257 | 1.646739 | 4.23211923 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 448 | 2.5499999999999995e-121 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g26397 | i0 | 98.054 | 487.739299610895 | 257 | 5 | 100 | 0 | 1 | 257 | 27157 | 26901 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 125349 | 448 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 15427492 | 15427492 | PRJEB58983_P_NODE_33193_length_237_cov_2.597561_g32778_i0 | PRJEB58983 | 33193 | 237 | 2.597561 | 6.15621957 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 172 | 1.5599999999999999e-38 | NTclustered | gi|2874253689|emb|OY969415.1| | 157466 | g32778 | i0 | 82.587 | 44.5949367088608 | 201 | 29 | 84 | 6 | 1 | 198 | 3915008 | 3914811 | MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 | blastn | 10569 | 172 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 21394195 | 21394195 | PRJEB58983_P_NODE_28697_length_251_cov_0.876404_g28282_i0 | PRJEB58983 | 28697 | 251 | 0.876404 | 2.19977404 | Chthonomonas | 1077265 | Bacteria | Bacteria | 171 | 6.02e-38 | NTclustered | gi|2874254000|emb|OY970325.1| | 157466 | g28282 | i0 | 79.681 | 15.5019920318725 | 251 | 40 | 99 | 9 | 1 | 250 | 1305581 | 1305821 | MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 | blastn | 3891 | 171 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 32783235 | 32783235 | PRJEB58983_P_NODE_32640_length_241_cov_2.351190_g32225_i0 | PRJEB58983 | 32640 | 241 | 2.35119 | 5.6663679 | Armatimonadetes bacterium Cent15-Ar3 | 1987502 | Bacteria | Bacteria | 95.1 | 3.3400000000000003e-22 | NR | OWU65760.1 | 1987502 | g32225 | i0 | 59.7 | 0.896265560165975 | 72 | 28 | 88.4 | 1 | 27 | 239 | 59 | 130 | OWU65760.1 MAG: hypothetical protein CBB60_003025 [Armatimonadetes bacterium Cent15-Ar3] | diamond | 216 | 95.1 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadetes bacterium Cent15-Ar3 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;